195 related articles for article (PubMed ID: 34694615)
1. Genome-Wide Identification of Polyadenylation Dynamics with TED-Seq.
Kwak Y; Kwak H
Methods Mol Biol; 2022; 2404():281-298. PubMed ID: 34694615
[TBL] [Abstract][Full Text] [Related]
2. TED-Seq Identifies the Dynamics of Poly(A) Length during ER Stress.
Woo YM; Kwak Y; Namkoong S; Kristjánsdóttir K; Lee SH; Lee JH; Kwak H
Cell Rep; 2018 Sep; 24(13):3630-3641.e7. PubMed ID: 30257221
[TBL] [Abstract][Full Text] [Related]
3. Single-molecule polyadenylated tail sequencing (SM-PAT-Seq) to measure polyA tail lengths transcriptome-wide.
Coon SL; Li T; Iben JR; Mattijssen S; Maraia RJ
Methods Enzymol; 2021; 655():119-137. PubMed ID: 34183118
[TBL] [Abstract][Full Text] [Related]
4. Measuring the tail: Methods for poly(A) tail profiling.
Brouze A; Krawczyk PS; Dziembowski A; Mroczek S
Wiley Interdiscip Rev RNA; 2023 Jan; 14(1):e1737. PubMed ID: 35617484
[TBL] [Abstract][Full Text] [Related]
5. Sequencing of Transcriptome-Wide Poly(A) Tails by PAIso-seq.
Liu Y; Lu F; Wang J
Methods Mol Biol; 2024; 2723():215-232. PubMed ID: 37824073
[TBL] [Abstract][Full Text] [Related]
6. PAT-Seq: A Method for Simultaneous Quantitation of Gene Expression, Poly(A)-Site Selection and Poly(A)-Length Distribution in Yeast Transcriptomes.
Swaminathan A; Harrison PF; Preiss T; Beilharz TH
Methods Mol Biol; 2019; 2049():141-164. PubMed ID: 31602610
[TBL] [Abstract][Full Text] [Related]
7. Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing.
Begik O; Diensthuber G; Liu H; Delgado-Tejedor A; Kontur C; Niazi AM; Valen E; Giraldez AJ; Beaudoin JD; Mattick JS; Novoa EM
Nat Methods; 2023 Jan; 20(1):75-85. PubMed ID: 36536091
[TBL] [Abstract][Full Text] [Related]
8. Poly(A) tail dynamics: Measuring polyadenylation, deadenylation and poly(A) tail length.
Murphy MR; Doymaz A; Kleiman FE
Methods Enzymol; 2021; 655():265-290. PubMed ID: 34183126
[TBL] [Abstract][Full Text] [Related]
9. CLT-seq as a universal homopolymer-sequencing concept reveals poly(A)-tail-tuned ncRNA regulation.
Su Q; Long Y; Wang J; Gou D
Brief Bioinform; 2023 Sep; 24(6):. PubMed ID: 37874949
[TBL] [Abstract][Full Text] [Related]
10. Poly(A)-ClickSeq: click-chemistry for next-generation 3΄-end sequencing without RNA enrichment or fragmentation.
Routh A; Ji P; Jaworski E; Xia Z; Li W; Wagner EJ
Nucleic Acids Res; 2017 Jul; 45(12):e112. PubMed ID: 28449108
[TBL] [Abstract][Full Text] [Related]
11. PolyAtailor: measuring poly(A) tail length from short-read and long-read sequencing data.
Liu M; Hao L; Yang S; Wu X
Brief Bioinform; 2022 Jul; 23(4):. PubMed ID: 35769001
[TBL] [Abstract][Full Text] [Related]
12. mTAIL-seq reveals dynamic poly(A) tail regulation in oocyte-to-embryo development.
Lim J; Lee M; Son A; Chang H; Kim VN
Genes Dev; 2016 Jul; 30(14):1671-82. PubMed ID: 27445395
[TBL] [Abstract][Full Text] [Related]
13. Development of Poly(A)-ClickSeq as a tool enabling simultaneous genome-wide poly(A)-site identification and differential expression analysis.
Elrod ND; Jaworski EA; Ji P; Wagner EJ; Routh A
Methods; 2019 Feb; 155():20-29. PubMed ID: 30625385
[TBL] [Abstract][Full Text] [Related]
14. Poly(a) selection introduces bias and undue noise in direct RNA-sequencing.
Viscardi MJ; Arribere JA
BMC Genomics; 2022 Jul; 23(1):530. PubMed ID: 35869428
[TBL] [Abstract][Full Text] [Related]
15. Dynamic and widespread control of poly(A) tail length during macrophage activation.
Kwak Y; Daly CWP; Fogarty EA; Grimson A; Kwak H
RNA; 2022 Jul; 28(7):947-971. PubMed ID: 35512831
[TBL] [Abstract][Full Text] [Related]
16. FLAM-seq: full-length mRNA sequencing reveals principles of poly(A) tail length control.
Legnini I; Alles J; Karaiskos N; Ayoub S; Rajewsky N
Nat Methods; 2019 Sep; 16(9):879-886. PubMed ID: 31384046
[TBL] [Abstract][Full Text] [Related]
17. Single-Molecule Poly(A) Tail Sequencing (SM-PATseq) Using the PacBio Platform.
Iben JR; Li T; Mattijssen S; Maraia RJ
Methods Mol Biol; 2024; 2723():285-301. PubMed ID: 37824077
[TBL] [Abstract][Full Text] [Related]
18. Poly(A) tale: From A to A; RNA polyadenylation in prokaryotes and eukaryotes.
Mofayezi A; Jadaliha M; Zangeneh FZ; Khoddami V
Wiley Interdiscip Rev RNA; 2024; 15(2):e1837. PubMed ID: 38485452
[TBL] [Abstract][Full Text] [Related]
19. Alternative polyadenylation analysis in animals and plants: newly developed strategies for profiling, processing and validation.
Zhang Y; Carrion SA; Zhang Y; Zhang X; Zinski AL; Michal JJ; Jiang Z
Int J Biol Sci; 2018; 14(12):1709-1714. PubMed ID: 30416385
[TBL] [Abstract][Full Text] [Related]
20. Poly(A)-seq: A method for direct sequencing and analysis of the transcriptomic poly(A)-tails.
Yu F; Zhang Y; Cheng C; Wang W; Zhou Z; Rang W; Yu H; Wei Y; Wu Q; Zhang Y
PLoS One; 2020; 15(6):e0234696. PubMed ID: 32544193
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]