These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
330 related articles for article (PubMed ID: 34696322)
1. Chemical and Enzymatic Probing of Viral RNAs: From Infancy to Maturity and Beyond. Gilmer O; Quignon E; Jousset AC; Paillart JC; Marquet R; Vivet-Boudou V Viruses; 2021 Sep; 13(10):. PubMed ID: 34696322 [TBL] [Abstract][Full Text] [Related]
2. RNA structure analysis of viruses using SHAPE. Burrill CP; Andino R Curr Protoc Microbiol; 2013 Oct; 30():15H.3.1-15H.3.12. PubMed ID: 24510890 [TBL] [Abstract][Full Text] [Related]
3. Purification and Structural Characterization of the Long Noncoding RNAs. Yankey A; Clark SC; Owens MC; Somarowthu S Methods Mol Biol; 2021; 2372():93-110. PubMed ID: 34417746 [TBL] [Abstract][Full Text] [Related]
7. Sequencing-based analysis of RNA structures in living cells with 2A3 via SHAPE-MaP. Incarnato D Methods Enzymol; 2023; 691():153-181. PubMed ID: 37914444 [TBL] [Abstract][Full Text] [Related]
8. The evolution of RNA structural probing methods: From gels to next-generation sequencing. Mailler E; Paillart JC; Marquet R; Smyth RP; Vivet-Boudou V Wiley Interdiscip Rev RNA; 2019 Mar; 10(2):e1518. PubMed ID: 30485688 [TBL] [Abstract][Full Text] [Related]
9. SHAPE-Seq 2.0: systematic optimization and extension of high-throughput chemical probing of RNA secondary structure with next generation sequencing. Loughrey D; Watters KE; Settle AH; Lucks JB Nucleic Acids Res; 2014 Dec; 42(21):e165. PubMed ID: 25303992 [TBL] [Abstract][Full Text] [Related]
10. Insights into secondary and tertiary interactions of dengue virus RNA by SHAPE. Sztuba-Solinska J; Le Grice SF Methods Mol Biol; 2014; 1138():225-39. PubMed ID: 24696340 [TBL] [Abstract][Full Text] [Related]
11. Selective 2'-hydroxyl acylation analyzed by primer extension and mutational profiling (SHAPE-MaP) for direct, versatile and accurate RNA structure analysis. Smola MJ; Rice GM; Busan S; Siegfried NA; Weeks KM Nat Protoc; 2015 Nov; 10(11):1643-69. PubMed ID: 26426499 [TBL] [Abstract][Full Text] [Related]
12. SHAPE Profiling to Probe Group II Intron Conformational Dynamics During Splicing. Wiryaman T; Toor N Methods Mol Biol; 2021; 2167():171-182. PubMed ID: 32712920 [TBL] [Abstract][Full Text] [Related]
13. Mapping RNA Structure In Vitro with SHAPE Chemistry and Next-Generation Sequencing (SHAPE-Seq). Watters KE; Lucks JB Methods Mol Biol; 2016; 1490():135-62. PubMed ID: 27665597 [TBL] [Abstract][Full Text] [Related]
14. Analysis of the RNA backbone: structural analysis of riboswitches by in-line probing and selective 2'-hydroxyl acylation and primer extension. Wakeman CA; Winkler WC Methods Mol Biol; 2009; 540():173-91. PubMed ID: 19381560 [TBL] [Abstract][Full Text] [Related]
16. Physical and Functional Analysis of Viral RNA Genomes by SHAPE. Boerneke MA; Ehrhardt JE; Weeks KM Annu Rev Virol; 2019 Sep; 6(1):93-117. PubMed ID: 31337286 [TBL] [Abstract][Full Text] [Related]
17. Characterizing RNA structures in vitro and in vivo with selective 2'-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq). Watters KE; Yu AM; Strobel EJ; Settle AH; Lucks JB Methods; 2016 Jul; 103():34-48. PubMed ID: 27064082 [TBL] [Abstract][Full Text] [Related]
18. Multiplexed RNA structure characterization with selective 2'-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq). Lucks JB; Mortimer SA; Trapnell C; Luo S; Aviran S; Schroth GP; Pachter L; Doudna JA; Arkin AP Proc Natl Acad Sci U S A; 2011 Jul; 108(27):11063-8. PubMed ID: 21642531 [TBL] [Abstract][Full Text] [Related]
19. Dissecting the secondary structure of the circular RNA of a nuclear viroid in vivo: A "naked" rod-like conformation similar but not identical to that observed in vitro. López-Carrasco A; Flores R RNA Biol; 2017 Aug; 14(8):1046-1054. PubMed ID: 27574720 [TBL] [Abstract][Full Text] [Related]
20. Novel Biochemical Tools for Probing HIV RNA Structure. Rausch JW; Sztuba-Solinska J; Lusvarghi S; Le Grice SF Methods Mol Biol; 2016; 1354():91-117. PubMed ID: 26714707 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]