240 related articles for article (PubMed ID: 34748535)
1. Comparison of metabolic states using genome-scale metabolic models.
Sarathy C; Breuer M; Kutmon M; Adriaens ME; Evelo CT; Arts ICW
PLoS Comput Biol; 2021 Nov; 17(11):e1009522. PubMed ID: 34748535
[TBL] [Abstract][Full Text] [Related]
2. Integration of transcriptomic data in a genome-scale metabolic model to investigate the link between obesity and breast cancer.
Granata I; Troiano E; Sangiovanni M; Guarracino MR
BMC Bioinformatics; 2019 Apr; 20(Suppl 4):162. PubMed ID: 30999849
[TBL] [Abstract][Full Text] [Related]
3. Diabetes and branched-chain amino acids: What is the link?
Bloomgarden Z
J Diabetes; 2018 May; 10(5):350-352. PubMed ID: 29369529
[TBL] [Abstract][Full Text] [Related]
4. Comprehensive evaluation of two genome-scale metabolic network models for Scheffersomyces stipitis.
Damiani AL; He QP; Jeffries TW; Wang J
Biotechnol Bioeng; 2015 Jun; 112(6):1250-62. PubMed ID: 25580821
[TBL] [Abstract][Full Text] [Related]
5. Contribution of branched chain amino acids to energy production and mevalonate synthesis in cancer cells.
Mikalayeva V; Pankevičiūtė M; Žvikas V; Skeberdis VA; Bordel S
Biochem Biophys Res Commun; 2021 Dec; 585():61-67. PubMed ID: 34794035
[TBL] [Abstract][Full Text] [Related]
6. Genome Scale-Differential Flux Analysis reveals deregulation of lung cell metabolism on SARS-CoV-2 infection.
Nanda P; Ghosh A
PLoS Comput Biol; 2021 Apr; 17(4):e1008860. PubMed ID: 33835998
[TBL] [Abstract][Full Text] [Related]
7. Computational modelling of genome-scale metabolic networks and its application to CHO cell cultures.
Rejc Ž; Magdevska L; Tršelič T; Osolin T; Vodopivec R; Mraz J; Pavliha E; Zimic N; Cvitanović T; Rozman D; Moškon M; Mraz M
Comput Biol Med; 2017 Sep; 88():150-160. PubMed ID: 28732234
[TBL] [Abstract][Full Text] [Related]
8. Metabolic Fate of Branched-Chain Amino Acids During Adipogenesis, in Adipocytes From Obese Mice and C2C12 Myotubes.
Estrada-Alcalde I; Tenorio-Guzman MR; Tovar AR; Salinas-Rubio D; Torre-Villalvazo I; Torres N; Noriega LG
J Cell Biochem; 2017 Apr; 118(4):808-818. PubMed ID: 27689828
[TBL] [Abstract][Full Text] [Related]
9. Towards dynamic genome-scale models.
Gilbert D; Heiner M; Jayaweera Y; Rohr C
Brief Bioinform; 2019 Jul; 20(4):1167-1180. PubMed ID: 29040409
[TBL] [Abstract][Full Text] [Related]
10. An unconventional uptake rate objective function approach enhances applicability of genome-scale models for mammalian cells.
Chen Y; McConnell BO; Gayatri Dhara V; Mukesh Naik H; Li CT; Antoniewicz MR; Betenbaugh MJ
NPJ Syst Biol Appl; 2019; 5():25. PubMed ID: 31341637
[TBL] [Abstract][Full Text] [Related]
11. Modeling the metabolic dynamics at the genome-scale by optimized yield analysis.
Luo H; Li P; Ji B; Nielsen J
Metab Eng; 2023 Jan; 75():119-130. PubMed ID: 36503050
[TBL] [Abstract][Full Text] [Related]
12. Regulation of adipose branched-chain amino acid catabolism enzyme expression and cross-adipose amino acid flux in human obesity.
Lackey DE; Lynch CJ; Olson KC; Mostaedi R; Ali M; Smith WH; Karpe F; Humphreys S; Bedinger DH; Dunn TN; Thomas AP; Oort PJ; Kieffer DA; Amin R; Bettaieb A; Haj FG; Permana P; Anthony TG; Adams SH
Am J Physiol Endocrinol Metab; 2013 Jun; 304(11):E1175-87. PubMed ID: 23512805
[TBL] [Abstract][Full Text] [Related]
13. Flux-coupled genes and their use in metabolic flux analysis.
Kim HU; Kim WJ; Lee SY
Biotechnol J; 2013 Sep; 8(9):1035-42. PubMed ID: 23420780
[TBL] [Abstract][Full Text] [Related]
14. Branched Chain Amino Acids in Metabolic Disease.
Arany Z; Neinast M
Curr Diab Rep; 2018 Aug; 18(10):76. PubMed ID: 30112615
[TBL] [Abstract][Full Text] [Related]
15. Software applications toward quantitative metabolic flux analysis and modeling.
Dandekar T; Fieselmann A; Majeed S; Ahmed Z
Brief Bioinform; 2014 Jan; 15(1):91-107. PubMed ID: 23142828
[TBL] [Abstract][Full Text] [Related]
16. Inflammation and ER stress regulate branched-chain amino acid uptake and metabolism in adipocytes.
Burrill JS; Long EK; Reilly B; Deng Y; Armitage IM; Scherer PE; Bernlohr DA
Mol Endocrinol; 2015 Mar; 29(3):411-20. PubMed ID: 25635940
[TBL] [Abstract][Full Text] [Related]
17. Teasing out missing reactions in genome-scale metabolic networks through hypergraph learning.
Chen C; Liao C; Liu YY
Nat Commun; 2023 Apr; 14(1):2375. PubMed ID: 37185345
[TBL] [Abstract][Full Text] [Related]
18. BCAA Metabolism and Insulin Sensitivity - Dysregulated by Metabolic Status?
Gannon NP; Schnuck JK; Vaughan RA
Mol Nutr Food Res; 2018 Mar; 62(6):e1700756. PubMed ID: 29377510
[TBL] [Abstract][Full Text] [Related]
19. Emerging perspectives on branched-chain amino acid metabolism during adipocyte differentiation.
Salinas-Rubio D; Tovar AR; Noriega LG
Curr Opin Clin Nutr Metab Care; 2018 Jan; 21(1):49-57. PubMed ID: 29035970
[TBL] [Abstract][Full Text] [Related]
20. Grohar: Automated Visualization of Genome-Scale Metabolic Models and Their Pathways.
Moškon M; Zimic N; Mraz M
J Comput Biol; 2018 May; 25(5):505-508. PubMed ID: 29461874
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]