BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

483 related articles for article (PubMed ID: 34788620)

  • 1. Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing.
    Leung SK; Jeffries AR; Castanho I; Jordan BT; Moore K; Davies JP; Dempster EL; Bray NJ; O'Neill P; Tseng E; Ahmed Z; Collier DA; Jeffery ED; Prabhakar S; Schalkwyk L; Jops C; Gandal MJ; Sheynkman GM; Hannon E; Mill J
    Cell Rep; 2021 Nov; 37(7):110022. PubMed ID: 34788620
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Deep Sequencing Reveals Uncharted Isoform Heterogeneity of the Protein-Coding Transcriptome in Cerebral Ischemia.
    Bhattarai S; Aly A; Garcia K; Ruiz D; Pontarelli F; Dharap A
    Mol Neurobiol; 2019 Feb; 56(2):1035-1043. PubMed ID: 29862458
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Comprehensive characterization of single-cell full-length isoforms in human and mouse with long-read sequencing.
    Tian L; Jabbari JS; Thijssen R; Gouil Q; Amarasinghe SL; Voogd O; Kariyawasam H; Du MRM; Schuster J; Wang C; Su S; Dong X; Law CW; Lucattini A; Prawer YDJ; Collar-Fernández C; Chung JD; Naim T; Chan A; Ly CH; Lynch GS; Ryall JG; Anttila CJA; Peng H; Anderson MA; Flensburg C; Majewski I; Roberts AW; Huang DCS; Clark MB; Ritchie ME
    Genome Biol; 2021 Nov; 22(1):310. PubMed ID: 34763716
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Transcript Identification Through Long-Read Sequencing.
    Seki M; Oka M; Xu L; Suzuki A; Suzuki Y
    Methods Mol Biol; 2021; 2284():531-541. PubMed ID: 33835462
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing.
    Treutlein B; Gokce O; Quake SR; Südhof TC
    Proc Natl Acad Sci U S A; 2014 Apr; 111(13):E1291-9. PubMed ID: 24639501
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Widespread splicing of repetitive element loci into coding regions of gene transcripts.
    Darby MM; Leek JT; Langmead B; Yolken RH; Sabunciyan S
    Hum Mol Genet; 2016 Nov; 25(22):4962-4982. PubMed ID: 28171598
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Knowledge-based reconstruction of mRNA transcripts with short sequencing reads for transcriptome research.
    Seok J; Xu W; Jiang H; Davis RW; Xiao W
    PLoS One; 2012; 7(2):e31440. PubMed ID: 22312447
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Developmental isoform diversity in the human neocortex informs neuropsychiatric risk mechanisms.
    Patowary A; Zhang P; Jops C; Vuong CK; Ge X; Hou K; Kim M; Gong N; Margolis M; Vo D; Wang X; Liu C; Pasaniuc B; Li JJ; Gandal MJ; de la Torre-Ubieta L
    bioRxiv; 2023 Oct; ():. PubMed ID: 36993726
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
    Hoang NV; Furtado A; Mason PJ; Marquardt A; Kasirajan L; Thirugnanasambandam PP; Botha FC; Henry RJ
    BMC Genomics; 2017 May; 18(1):395. PubMed ID: 28532419
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection.
    Nguyen Quang N; Goudey S; Ségéral E; Mohammad A; Lemoine S; Blugeon C; Versapuech M; Paillart JC; Berlioz-Torrent C; Emiliani S; Gallois-Montbrun S
    Retrovirology; 2020 Aug; 17(1):25. PubMed ID: 32807178
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Alternative Splicing Signatures in RNA-seq Data: Percent Spliced in (PSI).
    Schafer S; Miao K; Benson CC; Heinig M; Cook SA; Hubner N
    Curr Protoc Hum Genet; 2015 Oct; 87():11.16.1-11.16.14. PubMed ID: 26439713
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The full-length transcriptome of
    Roach NP; Sadowski N; Alessi AF; Timp W; Taylor J; Kim JK
    Genome Res; 2020 Feb; 30(2):299-312. PubMed ID: 32024661
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Long-Read Transcriptome of Equine Bronchoalveolar Cells.
    Sage SE; Nicholson P; Leeb T; Gerber V; Jagannathan V
    Genes (Basel); 2022 Sep; 13(10):. PubMed ID: 36292607
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Long read isoform sequencing reveals hidden transcriptional complexity between cattle subspecies.
    Ren Y; Tseng E; Smith TPL; Hiendleder S; Williams JL; Low WY
    BMC Genomics; 2023 Mar; 24(1):108. PubMed ID: 36915055
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Identifying differential alternative splicing events from RNA sequencing data using RNASeq-MATS.
    Park JW; Tokheim C; Shen S; Xing Y
    Methods Mol Biol; 2013; 1038():171-9. PubMed ID: 23872975
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A comparison of alternative mRNA splicing in the CD4 and CD8 T cell lineages.
    Liu X; Andrews MV; Skinner JP; Johanson TM; Chong MMW
    Mol Immunol; 2021 May; 133():53-62. PubMed ID: 33631555
    [TBL] [Abstract][Full Text] [Related]  

  • 17. PacBio single molecule long-read sequencing provides insight into the complexity and diversity of the Pinctada fucata martensii transcriptome.
    Zhang H; Xu H; Liu H; Pan X; Xu M; Zhang G; He M
    BMC Genomics; 2020 Jul; 21(1):481. PubMed ID: 32660426
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Universal Alternative Splicing of Noncoding Exons.
    Deveson IW; Brunck ME; Blackburn J; Tseng E; Hon T; Clark TA; Clark MB; Crawford J; Dinger ME; Nielsen LK; Mattick JS; Mercer TR
    Cell Syst; 2018 Feb; 6(2):245-255.e5. PubMed ID: 29396323
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Extensive transcriptional heterogeneity revealed by isoform profiling.
    Pelechano V; Wei W; Steinmetz LM
    Nature; 2013 May; 497(7447):127-31. PubMed ID: 23615609
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Reconstruction of the full-length transcriptome atlas using PacBio Iso-Seq provides insight into the alternative splicing in Gossypium australe.
    Feng S; Xu M; Liu F; Cui C; Zhou B
    BMC Plant Biol; 2019 Aug; 19(1):365. PubMed ID: 31426739
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 25.