240 related articles for article (PubMed ID: 34788838)
1. GMrepo v2: a curated human gut microbiome database with special focus on disease markers and cross-dataset comparison.
Dai D; Zhu J; Sun C; Li M; Liu J; Wu S; Ning K; He LJ; Zhao XM; Chen WH
Nucleic Acids Res; 2022 Jan; 50(D1):D777-D784. PubMed ID: 34788838
[TBL] [Abstract][Full Text] [Related]
2. GMrepo: a database of curated and consistently annotated human gut metagenomes.
Wu S; Sun C; Li Y; Wang T; Jia L; Lai S; Yang Y; Luo P; Dai D; Yang YQ; Luo Q; Gao NL; Ning K; He LJ; Zhao XM; Chen WH
Nucleic Acids Res; 2020 Jan; 48(D1):D545-D553. PubMed ID: 31504765
[TBL] [Abstract][Full Text] [Related]
3. gutMEGA: a database of the human gut MEtaGenome Atlas.
Zhang Q; Yu K; Li S; Zhang X; Zhao Q; Zhao X; Liu Z; Cheng H; Liu ZX; Li X
Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32496513
[TBL] [Abstract][Full Text] [Related]
4. mBodyMap: a curated database for microbes across human body and their associations with health and diseases.
Jin H; Hu G; Sun C; Duan Y; Zhang Z; Liu Z; Zhao XM; Chen WH
Nucleic Acids Res; 2022 Jan; 50(D1):D808-D816. PubMed ID: 34718713
[TBL] [Abstract][Full Text] [Related]
5. CRAMdb: a comprehensive database for composition and roles of microbiome in animals.
Lei B; Xu Y; Lei Y; Li C; Zhou P; Wang L; Yang Q; Li X; Li F; Liu C; Cui C; Chen T; Ni W; Hu S
Nucleic Acids Res; 2023 Jan; 51(D1):D700-D707. PubMed ID: 36318246
[TBL] [Abstract][Full Text] [Related]
6. GutBalance: a server for the human gut microbiome-based disease prediction and biomarker discovery with compositionality addressed.
Yang F; Zou Q; Gao B
Brief Bioinform; 2021 Sep; 22(5):. PubMed ID: 33515036
[TBL] [Abstract][Full Text] [Related]
7. Comparison between 16S rRNA and shotgun sequencing data for the taxonomic characterization of the gut microbiota.
Durazzi F; Sala C; Castellani G; Manfreda G; Remondini D; De Cesare A
Sci Rep; 2021 Feb; 11(1):3030. PubMed ID: 33542369
[TBL] [Abstract][Full Text] [Related]
8. gutMGene: a comprehensive database for target genes of gut microbes and microbial metabolites.
Cheng L; Qi C; Yang H; Lu M; Cai Y; Fu T; Ren J; Jin Q; Zhang X
Nucleic Acids Res; 2022 Jan; 50(D1):D795-D800. PubMed ID: 34500458
[TBL] [Abstract][Full Text] [Related]
9. Human reference gut microbiome catalog including newly assembled genomes from under-represented Asian metagenomes.
Kim CY; Lee M; Yang S; Kim K; Yong D; Kim HR; Lee I
Genome Med; 2021 Aug; 13(1):134. PubMed ID: 34446072
[TBL] [Abstract][Full Text] [Related]
10. Quantitative Assessment of Shotgun Metagenomics and 16S rDNA Amplicon Sequencing in the Study of Human Gut Microbiome.
Laudadio I; Fulci V; Palone F; Stronati L; Cucchiara S; Carissimi C
OMICS; 2018 Apr; 22(4):248-254. PubMed ID: 29652573
[TBL] [Abstract][Full Text] [Related]
11. Functional dynamics of bacterial species in the mouse gut microbiome revealed by metagenomic and metatranscriptomic analyses.
Chung YW; Gwak HJ; Moon S; Rho M; Ryu JH
PLoS One; 2020; 15(1):e0227886. PubMed ID: 31978162
[TBL] [Abstract][Full Text] [Related]
12. AMDB: a database of animal gut microbial communities with manually curated metadata.
Yang J; Park J; Jung Y; Chun J
Nucleic Acids Res; 2022 Jan; 50(D1):D729-D735. PubMed ID: 34747470
[TBL] [Abstract][Full Text] [Related]
13. Assessment of
Hugerth LW; Pereira M; Zha Y; Seifert M; Kaldhusdal V; Boulund F; Krog MC; Bashir Z; Hamsten M; Fransson E; Svarre-Nielsen H; Schuppe-Koistinen I; Engstrand L
mSphere; 2020 Nov; 5(6):. PubMed ID: 33208514
[TBL] [Abstract][Full Text] [Related]
14. MICHELINdb: a web-based tool for mining of helminth-microbiota interaction datasets, and a meta-analysis of current research.
Scotti R; Southern S; Boinett C; Jenkins TP; Cortés A; Cantacessi C
Microbiome; 2020 Feb; 8(1):10. PubMed ID: 32008578
[TBL] [Abstract][Full Text] [Related]
15. ICoVeR - an interactive visualization tool for verification and refinement of metagenomic bins.
Broeksema B; Calusinska M; McGee F; Winter K; Bongiovanni F; Goux X; Wilmes P; Delfosse P; Ghoniem M
BMC Bioinformatics; 2017 May; 18(1):233. PubMed ID: 28464793
[TBL] [Abstract][Full Text] [Related]
16. A comprehensive human minimal gut metagenome extends the host's metabolic potential.
Parras-Moltó M; Aguirre de Cárcer D
Microb Genom; 2020 Nov; 6(11):. PubMed ID: 33141656
[TBL] [Abstract][Full Text] [Related]
17. The gut mycobiome of the Human Microbiome Project healthy cohort.
Nash AK; Auchtung TA; Wong MC; Smith DP; Gesell JR; Ross MC; Stewart CJ; Metcalf GA; Muzny DM; Gibbs RA; Ajami NJ; Petrosino JF
Microbiome; 2017 Nov; 5(1):153. PubMed ID: 29178920
[TBL] [Abstract][Full Text] [Related]
18. The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information.
Chen T; Yu WH; Izard J; Baranova OV; Lakshmanan A; Dewhirst FE
Database (Oxford); 2010 Jul; 2010():baq013. PubMed ID: 20624719
[TBL] [Abstract][Full Text] [Related]
19. Metagenomics: a path to understanding the gut microbiome.
Yen S; Johnson JS
Mamm Genome; 2021 Aug; 32(4):282-296. PubMed ID: 34259891
[TBL] [Abstract][Full Text] [Related]
20. Meta-Apo improves accuracy of 16S-amplicon-based prediction of microbiome function.
Jing G; Zhang Y; Cui W; Liu L; Xu J; Su X
BMC Genomics; 2021 Jan; 22(1):9. PubMed ID: 33407112
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]