BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

176 related articles for article (PubMed ID: 34789727)

  • 1. Structures of prokaryotic ubiquitin-like protein Pup in complex with depupylase Dop reveal the mechanism of catalytic phosphate formation.
    Cui H; Müller AU; Leibundgut M; Tian J; Ban N; Weber-Ban E
    Nat Commun; 2021 Nov; 12(1):6635. PubMed ID: 34789727
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Depupylase Dop Requires Inorganic Phosphate in the Active Site for Catalysis.
    Bolten M; Vahlensieck C; Lipp C; Leibundgut M; Ban N; Weber-Ban E
    J Biol Chem; 2017 Mar; 292(10):4044-4053. PubMed ID: 28119453
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Structures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway.
    Özcelik D; Barandun J; Schmitz N; Sutter M; Guth E; Damberger FF; Allain FH; Ban N; Weber-Ban E
    Nat Commun; 2012; 3():1014. PubMed ID: 22910360
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Dop functions as a depupylase in the prokaryotic ubiquitin-like modification pathway.
    Imkamp F; Striebel F; Sutter M; Ozcelik D; Zimmermann N; Sander P; Weber-Ban E
    EMBO Rep; 2010 Oct; 11(10):791-7. PubMed ID: 20798673
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Prokaryotic ubiquitin-like protein remains intrinsically disordered when covalently attached to proteasomal target proteins.
    Barandun J; Damberger FF; Delley CL; Laederach J; Allain FH; Weber-Ban E
    BMC Struct Biol; 2017 Feb; 17(1):1. PubMed ID: 28143508
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A kinetic model for the prevalence of mono- over poly-pupylation.
    Regev O; Roth Z; Korman M; Khalaila I; Gur E
    FEBS J; 2015 Nov; 282(21):4176-86. PubMed ID: 26277445
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Allosteric transitions direct protein tagging by PafA, the prokaryotic ubiquitin-like protein (Pup) ligase.
    Ofer N; Forer N; Korman M; Vishkautzan M; Khalaila I; Gur E
    J Biol Chem; 2013 Apr; 288(16):11287-93. PubMed ID: 23471967
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Activity of the mycobacterial proteasomal ATPase Mpa is reversibly regulated by pupylation.
    Delley CL; Striebel F; Heydenreich FM; Özcelik D; Weber-Ban E
    J Biol Chem; 2012 Mar; 287(11):7907-14. PubMed ID: 22210775
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The Mechanism of Mycobacterium smegmatis PafA Self-Pupylation.
    Chen X; Li C; Wang L; Liu Y; Li C; Zhang J
    PLoS One; 2016; 11(3):e0151021. PubMed ID: 26953889
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Bacterial ubiquitin-like modifier Pup is deamidated and conjugated to substrates by distinct but homologous enzymes.
    Striebel F; Imkamp F; Sutter M; Steiner M; Mamedov A; Weber-Ban E
    Nat Struct Mol Biol; 2009 Jun; 16(6):647-51. PubMed ID: 19448618
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A conserved loop sequence of the proteasome system depupylase Dop regulates substrate selectivity in Mycobacterium tuberculosis.
    Yoo JH; Kahne SC; Darwin KH
    J Biol Chem; 2022 Oct; 298(10):102478. PubMed ID: 36100038
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Proteasome accessory factor A (PafA) transferase activity makes sense in the light of its homology with glutamine synthetase.
    Hecht N; Regev O; Dovrat D; Aharoni A; Gur E
    J Mol Biol; 2018 Mar; 430(5):668-681. PubMed ID: 29397952
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Deletion of dop in Mycobacterium smegmatis abolishes pupylation of protein substrates in vivo.
    Imkamp F; Rosenberger T; Striebel F; Keller PM; Amstutz B; Sander P; Weber-Ban E
    Mol Microbiol; 2010 Feb; 75(3):744-54. PubMed ID: 20025664
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Molecular analysis of the prokaryotic ubiquitin-like protein (Pup) conjugation pathway in Mycobacterium tuberculosis.
    Cerda-Maira FA; Pearce MJ; Fuortes M; Bishai WR; Hubbard SR; Darwin KH
    Mol Microbiol; 2010 Sep; 77(5):1123-35. PubMed ID: 20636328
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Genetic and Proteomic Analyses of Pupylation in Streptomyces coelicolor.
    Compton CL; Fernandopulle MS; Nagari RT; Sello JK
    J Bacteriol; 2015 Sep; 197(17):2747-53. PubMed ID: 26031910
    [TBL] [Abstract][Full Text] [Related]  

  • 16.
    Zhang S; Burns-Huang KE; Janssen GV; Li H; Ovaa H; Hedstrom L; Darwin KH
    mBio; 2017 Feb; 8(1):. PubMed ID: 28223451
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Mycobacterial ubiquitin-like protein ligase PafA follows a two-step reaction pathway with a phosphorylated pup intermediate.
    Guth E; Thommen M; Weber-Ban E
    J Biol Chem; 2011 Feb; 286(6):4412-9. PubMed ID: 21081505
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Deciphering Molecular Virulence Mechanism of Mycobacterium tuberculosis Dop isopeptidase Based on Its Sequence-Structure-Function Linkage.
    Prathiviraj R; Chellapandi P
    Protein J; 2020 Feb; 39(1):33-45. PubMed ID: 31760575
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Analysis of pupylation of Streptomyces hygroscopicus 5008 in vitro.
    Xu X; Niu Y; Liang K; Shen G; Cao Q; Yang Y
    Biochem Biophys Res Commun; 2016 May; 474(1):126-130. PubMed ID: 27105915
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Targets of ubiquitin like system in mycobacteria and related actinobacterial species.
    Akhter Y; Thakur S
    Microbiol Res; 2017 Nov; 204():9-29. PubMed ID: 28870295
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.