BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

177 related articles for article (PubMed ID: 34828415)

  • 21. HAlign: Fast multiple similar DNA/RNA sequence alignment based on the centre star strategy.
    Zou Q; Hu Q; Guo M; Wang G
    Bioinformatics; 2015 Aug; 31(15):2475-81. PubMed ID: 25812743
    [TBL] [Abstract][Full Text] [Related]  

  • 22. A model of evolution and structure for multiple sequence alignment.
    Löytynoja A; Goldman N
    Philos Trans R Soc Lond B Biol Sci; 2008 Dec; 363(1512):3913-9. PubMed ID: 18852103
    [TBL] [Abstract][Full Text] [Related]  

  • 23. MSACompro: protein multiple sequence alignment using predicted secondary structure, solvent accessibility, and residue-residue contacts.
    Deng X; Cheng J
    BMC Bioinformatics; 2011 Dec; 12():472. PubMed ID: 22168237
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Improved Hidden Markov Model training for multiple sequence alignment by a particle swarm optimization-evolutionary algorithm hybrid.
    Rasmussen TK; Krink T
    Biosystems; 2003 Nov; 72(1-2):5-17. PubMed ID: 14642655
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Accelerated large-scale multiple sequence alignment.
    Lloyd S; Snell QO
    BMC Bioinformatics; 2011 Dec; 12():466. PubMed ID: 22151470
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Efficient mapping of genomic sequences to optimize multiple pairwise alignment in hybrid cluster platforms.
    Montañola A; Roig C; Hernández P
    J Integr Bioinform; 2014 Oct; 11(3):251. PubMed ID: 25339085
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Fast alignment-free sequence comparison using spaced-word frequencies.
    Leimeister CA; Boden M; Horwege S; Lindner S; Morgenstern B
    Bioinformatics; 2014 Jul; 30(14):1991-9. PubMed ID: 24700317
    [TBL] [Abstract][Full Text] [Related]  

  • 28. TreeRefiner: a tool for refining a multiple alignment on a phylogenetic tree.
    Manohar A; Batzoglou S
    Proc IEEE Comput Syst Bioinform Conf; 2005; ():111-9. PubMed ID: 16447969
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Making automated multiple alignments of very large numbers of protein sequences.
    Sievers F; Dineen D; Wilm A; Higgins DG
    Bioinformatics; 2013 Apr; 29(8):989-95. PubMed ID: 23428640
    [TBL] [Abstract][Full Text] [Related]  

  • 30. PnpProbs: a better multiple sequence alignment tool by better handling of guide trees.
    Ye Y; Lam TW; Ting HF
    BMC Bioinformatics; 2016 Aug; 17 Suppl 8(Suppl 8):285. PubMed ID: 27585754
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Pandit: a database of protein and associated nucleotide domains with inferred trees.
    Whelan S; de Bakker PI; Goldman N
    Bioinformatics; 2003 Aug; 19(12):1556-63. PubMed ID: 12912837
    [TBL] [Abstract][Full Text] [Related]  

  • 32. MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences.
    Schwartz S; Elnitski L; Li M; Weirauch M; Riemer C; Smit A; ; Green ED; Hardison RC; Miller W
    Nucleic Acids Res; 2003 Jul; 31(13):3518-24. PubMed ID: 12824357
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Characterization of pairwise and multiple sequence alignment errors.
    Landan G; Graur D
    Gene; 2009 Jul; 441(1-2):141-7. PubMed ID: 18614299
    [TBL] [Abstract][Full Text] [Related]  

  • 34. MAVID multiple alignment server.
    Bray N; Pachter L
    Nucleic Acids Res; 2003 Jul; 31(13):3525-6. PubMed ID: 12824358
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Aligning Protein-Coding Nucleotide Sequences with MACSE.
    Ranwez V; Chantret N; Delsuc F
    Methods Mol Biol; 2021; 2231():51-70. PubMed ID: 33289886
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Cooperation of Spaln and Prrn5 for Construction of Gene-Structure-Aware Multiple Sequence Alignment.
    Gotoh O
    Methods Mol Biol; 2021; 2231():71-88. PubMed ID: 33289887
    [TBL] [Abstract][Full Text] [Related]  

  • 37. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences.
    Bininda-Emonds OR
    BMC Bioinformatics; 2005 Jun; 6():156. PubMed ID: 15969769
    [TBL] [Abstract][Full Text] [Related]  

  • 38. CSA: an efficient algorithm to improve circular DNA multiple alignment.
    Fernandes F; Pereira L; Freitas AT
    BMC Bioinformatics; 2009 Jul; 10():230. PubMed ID: 19627599
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Progressive alignment of genomic signals by multiple dynamic time warping.
    Skutkova H; Vitek M; Sedlar K; Provaznik I
    J Theor Biol; 2015 Nov; 385():20-30. PubMed ID: 26300069
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Scoring profile-to-profile sequence alignments.
    Wang G; Dunbrack RL
    Protein Sci; 2004 Jun; 13(6):1612-26. PubMed ID: 15152092
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 9.