210 related articles for article (PubMed ID: 34847734)
1. GoVec: Gene Ontology Representation Learning Using Weighted Heterogeneous Graph and Meta-Path.
Nourani E
J Comput Biol; 2021 Dec; 28(12):1196-1207. PubMed ID: 34847734
[TBL] [Abstract][Full Text] [Related]
2. Onto2Vec: joint vector-based representation of biological entities and their ontology-based annotations.
Smaili FZ; Gao X; Hoehndorf R
Bioinformatics; 2018 Jul; 34(13):i52-i60. PubMed ID: 29949999
[TBL] [Abstract][Full Text] [Related]
3. Evolving knowledge graph similarity for supervised learning in complex biomedical domains.
Sousa RT; Silva S; Pesquita C
BMC Bioinformatics; 2020 Jan; 21(1):6. PubMed ID: 31900127
[TBL] [Abstract][Full Text] [Related]
4. edge2vec: Representation learning using edge semantics for biomedical knowledge discovery.
Gao Z; Fu G; Ouyang C; Tsutsui S; Liu X; Yang J; Gessner C; Foote B; Wild D; Ding Y; Yu Q
BMC Bioinformatics; 2019 Jun; 20(1):306. PubMed ID: 31238875
[TBL] [Abstract][Full Text] [Related]
5. Matching biomedical ontologies with GCN-based feature propagation.
Wang P; Zou S; Liu J; Ke W
Math Biosci Eng; 2022 Jun; 19(8):8479-8504. PubMed ID: 35801474
[TBL] [Abstract][Full Text] [Related]
6. Learning representations for gene ontology terms by jointly encoding graph structure and textual node descriptors.
Zhao L; Sun H; Cao X; Wen N; Wang J; Wang C
Brief Bioinform; 2022 Sep; 23(5):. PubMed ID: 35901452
[TBL] [Abstract][Full Text] [Related]
7. Graph representation learning in bioinformatics: trends, methods and applications.
Yi HC; You ZH; Huang DS; Kwoh CK
Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34471921
[TBL] [Abstract][Full Text] [Related]
8. Learning global dependencies and multi-semantics within heterogeneous graph for predicting disease-related lncRNAs.
Xuan P; Wang S; Cui H; Zhao Y; Zhang T; Wu P
Brief Bioinform; 2022 Sep; 23(5):. PubMed ID: 36088549
[TBL] [Abstract][Full Text] [Related]
9. Explaining protein-protein interactions with knowledge graph-based semantic similarity.
Sousa RT; Silva S; Pesquita C
Comput Biol Med; 2024 Mar; 170():108076. PubMed ID: 38308873
[TBL] [Abstract][Full Text] [Related]
10. A Collection of Benchmark Data Sets for Knowledge Graph-based Similarity in the Biomedical Domain.
Cardoso C; Sousa RT; Köhler S; Pesquita C
Database (Oxford); 2020 Jan; 2020():. PubMed ID: 33181823
[TBL] [Abstract][Full Text] [Related]
11. Path-based knowledge reasoning with textual semantic information for medical knowledge graph completion.
Lan Y; He S; Liu K; Zeng X; Liu S; Zhao J
BMC Med Inform Decis Mak; 2021 Nov; 21(Suppl 9):335. PubMed ID: 34844576
[TBL] [Abstract][Full Text] [Related]
12. HPO2Vec+: Leveraging heterogeneous knowledge resources to enrich node embeddings for the Human Phenotype Ontology.
Shen F; Peng S; Fan Y; Wen A; Liu S; Wang Y; Wang L; Liu H
J Biomed Inform; 2019 Aug; 96():103246. PubMed ID: 31255713
[TBL] [Abstract][Full Text] [Related]
13. Graph Transformer Networks: Learning meta-path graphs to improve GNNs.
Yun S; Jeong M; Yoo S; Lee S; Yi SS; Kim R; Kang J; Kim HJ
Neural Netw; 2022 Sep; 153():104-119. PubMed ID: 35716619
[TBL] [Abstract][Full Text] [Related]
14. A graph-based semantic similarity measure for the gene ontology.
Alvarez MA; Yan C
J Bioinform Comput Biol; 2011 Dec; 9(6):681-95. PubMed ID: 22084008
[TBL] [Abstract][Full Text] [Related]
15. A New Path Based Hybrid Measure for Gene Ontology Similarity.
Bandyopadhyay S; Mallick K
IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(1):116-27. PubMed ID: 26355512
[TBL] [Abstract][Full Text] [Related]
16. HESML: a real-time semantic measures library for the biomedical domain with a reproducible survey.
Lastra-Díaz JJ; Lara-Clares A; Garcia-Serrano A
BMC Bioinformatics; 2022 Jan; 23(1):23. PubMed ID: 34991460
[TBL] [Abstract][Full Text] [Related]
17. Unsupervised Event Graph Representation and Similarity Learning on Biomedical Literature.
Frisoni G; Moro G; Carlassare G; Carbonaro A
Sensors (Basel); 2021 Dec; 22(1):. PubMed ID: 35009544
[TBL] [Abstract][Full Text] [Related]
18. Inferring ontology graph structures using OWL reasoning.
Rodríguez-García MÁ; Hoehndorf R
BMC Bioinformatics; 2018 Jan; 19(1):7. PubMed ID: 29304741
[TBL] [Abstract][Full Text] [Related]
19. Bootstrapping Adversarial Learning of Biomedical Ontology Alignments.
Maldonado RM; Harabagiu SM
AMIA Annu Symp Proc; 2019; 2019():627-636. PubMed ID: 32308857
[TBL] [Abstract][Full Text] [Related]
20. Text mining-based word representations for biomedical data analysis and protein-protein interaction networks in machine learning tasks.
Alachram H; Chereda H; Beißbarth T; Wingender E; Stegmaier P
PLoS One; 2021; 16(10):e0258623. PubMed ID: 34653224
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]