345 related articles for article (PubMed ID: 34908151)
1. Highly conserved s2m element of SARS-CoV-2 dimerizes via a kissing complex and interacts with host miRNA-1307-3p.
Imperatore JA; Cunningham CL; Pellegrene KA; Brinson RG; Marino JP; Evanseck JD; Mihailescu MR
Nucleic Acids Res; 2022 Jan; 50(2):1017-1032. PubMed ID: 34908151
[TBL] [Abstract][Full Text] [Related]
2. The Highly Conserved Stem-Loop II Motif Is Dispensable for SARS-CoV-2.
Jiang H; Joshi A; Gan T; Janowski AB; Fujii C; Bricker TL; Darling TL; Harastani HH; Seehra K; Chen H; Tahan S; Jung A; Febles B; Blatter JA; Handley SA; Parikh BA; Wang D; Boon ACM
J Virol; 2023 Jun; 97(6):e0063523. PubMed ID: 37223945
[TBL] [Abstract][Full Text] [Related]
3. Effect of the SARS-CoV-2 Delta-associated G15U mutation on the s2m element dimerization and its interactions with miR-1307-3p.
Cunningham CL; Frye CJ; Makowski JA; Kensinger AH; Shine M; Milback EJ; Lackey PE; Evanseck JD; Mihailescu MR
RNA; 2023 Nov; 29(11):1754-1771. PubMed ID: 37604684
[TBL] [Abstract][Full Text] [Related]
4. Targeting the Conserved Stem Loop 2 Motif in the SARS-CoV-2 Genome.
Lulla V; Wandel MP; Bandyra KJ; Ulferts R; Wu M; Dendooven T; Yang X; Doyle N; Oerum S; Beale R; O'Rourke SM; Randow F; Maier HJ; Scott W; Ding Y; Firth AE; Bloznelyte K; Luisi BF
J Virol; 2021 Jun; 95(14):e0066321. PubMed ID: 33963053
[TBL] [Abstract][Full Text] [Related]
5. Global cataloguing of variations in untranslated regions of viral genome and prediction of key host RNA binding protein-microRNA interactions modulating genome stability in SARS-CoV-2.
Mukherjee M; Goswami S
PLoS One; 2020; 15(8):e0237559. PubMed ID: 32780783
[TBL] [Abstract][Full Text] [Related]
6. Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements.
Manfredonia I; Nithin C; Ponce-Salvatierra A; Ghosh P; Wirecki TK; Marinus T; Ogando NS; Snijder EJ; van Hemert MJ; Bujnicki JM; Incarnato D
Nucleic Acids Res; 2020 Dec; 48(22):12436-12452. PubMed ID: 33166999
[TBL] [Abstract][Full Text] [Related]
7. The low abundance of CpG in the SARS-CoV-2 genome is not an evolutionarily signature of ZAP.
Afrasiabi A; Alinejad-Rokny H; Khosh A; Rahnama M; Lovell N; Xu Z; Ebrahimi D
Sci Rep; 2022 Feb; 12(1):2420. PubMed ID: 35165300
[TBL] [Abstract][Full Text] [Related]
8. RNA sequence and ligand binding alter conformational profile of SARS-CoV-2 stem loop II motif.
Aldhumani AH; Hossain MI; Fairchild EA; Boesger H; Marino EC; Myers M; Hines JV
Biochem Biophys Res Commun; 2021 Mar; 545():75-80. PubMed ID: 33545635
[TBL] [Abstract][Full Text] [Related]
9. Effect of the SARS-CoV-2 Delta-associated G15U mutation on the s2m element dimerization and its interactions with miR-1307-3p.
Cunningham CL; Frye CJ; Makowski JA; Kensinger AH; Shine M; Milback EJ; Lackey PE; Evanseck JD; Mihailescu MR
bioRxiv; 2023 Feb; ():. PubMed ID: 36798421
[TBL] [Abstract][Full Text] [Related]
10. De novo 3D models of SARS-CoV-2 RNA elements from consensus experimental secondary structures.
Rangan R; Watkins AM; Chacon J; Kretsch R; Kladwang W; Zheludev IN; Townley J; Rynge M; Thain G; Das R
Nucleic Acids Res; 2021 Apr; 49(6):3092-3108. PubMed ID: 33693814
[TBL] [Abstract][Full Text] [Related]
11. Potential Therapeutic Effect of Micrornas in Extracellular Vesicles from Mesenchymal Stem Cells against SARS-CoV-2.
Park JH; Choi Y; Lim CW; Park JM; Yu SH; Kim Y; Han HJ; Kim CH; Song YS; Kim C; Yu SR; Oh EY; Lee SM; Moon J
Cells; 2021 Sep; 10(9):. PubMed ID: 34572043
[TBL] [Abstract][Full Text] [Related]
12. The RNA Architecture of the SARS-CoV-2 3'-Untranslated Region.
Zhao J; Qiu J; Aryal S; Hackett JL; Wang J
Viruses; 2020 Dec; 12(12):. PubMed ID: 33371200
[TBL] [Abstract][Full Text] [Related]
13. No species-level losses of s2m suggests critical role in replication of SARS-related coronaviruses.
Gilbert C; Tengs T
Sci Rep; 2021 Aug; 11(1):16145. PubMed ID: 34373516
[TBL] [Abstract][Full Text] [Related]
14. Deletion of the s2m RNA Structure in the Avian Coronavirus Infectious Bronchitis Virus and Human Astrovirus Results in Sequence Insertions.
Keep S; Dowgier G; Lulla V; Britton P; Oade M; Freimanis G; Tennakoon C; Jonassen CM; Tengs T; Bickerton E
J Virol; 2023 Mar; 97(3):e0003823. PubMed ID: 36779761
[TBL] [Abstract][Full Text] [Related]
15. High frequency of transition to transversion ratio in the stem region of RNA secondary structure of untranslated region of SARS-CoV-2.
Dash M; Meher P; Aditya Kumar ; Satapathy SS; Namsa ND
PeerJ; 2024; 12():e16962. PubMed ID: 38666080
[TBL] [Abstract][Full Text] [Related]
16. Implications of SARS-CoV-2 Mutations for Genomic RNA Structure and Host microRNA Targeting.
Hosseini Rad Sm A; McLellan AD
Int J Mol Sci; 2020 Jul; 21(13):. PubMed ID: 32645951
[TBL] [Abstract][Full Text] [Related]
17. Secondary structure determination of conserved SARS-CoV-2 RNA elements by NMR spectroscopy.
Wacker A; Weigand JE; Akabayov SR; Altincekic N; Bains JK; Banijamali E; Binas O; Castillo-Martinez J; Cetiner E; Ceylan B; Chiu LY; Davila-Calderon J; Dhamotharan K; Duchardt-Ferner E; Ferner J; Frydman L; Fürtig B; Gallego J; Grün JT; Hacker C; Haddad C; Hähnke M; Hengesbach M; Hiller F; Hohmann KF; Hymon D; de Jesus V; Jonker H; Keller H; Knezic B; Landgraf T; Löhr F; Luo L; Mertinkus KR; Muhs C; Novakovic M; Oxenfarth A; Palomino-Schätzlein M; Petzold K; Peter SA; Pyper DJ; Qureshi NS; Riad M; Richter C; Saxena K; Schamber T; Scherf T; Schlagnitweit J; Schlundt A; Schnieders R; Schwalbe H; Simba-Lahuasi A; Sreeramulu S; Stirnal E; Sudakov A; Tants JN; Tolbert BS; Vögele J; Weiß L; Wirmer-Bartoschek J; Wirtz Martin MA; Wöhnert J; Zetzsche H
Nucleic Acids Res; 2020 Dec; 48(22):12415-12435. PubMed ID: 33167030
[TBL] [Abstract][Full Text] [Related]
18. The structure of a rigorously conserved RNA element within the SARS virus genome.
Robertson MP; Igel H; Baertsch R; Haussler D; Ares M; Scott WG
PLoS Biol; 2005 Jan; 3(1):e5. PubMed ID: 15630477
[TBL] [Abstract][Full Text] [Related]
19. Genome-scale deconvolution of RNA structure ensembles.
Morandi E; Manfredonia I; Simon LM; Anselmi F; van Hemert MJ; Oliviero S; Incarnato D
Nat Methods; 2021 Mar; 18(3):249-252. PubMed ID: 33619392
[TBL] [Abstract][Full Text] [Related]
20. MicroRNA-Mediated Regulation of the Virus Cycle and Pathogenesis in the SARS-CoV-2 Disease.
Battaglia R; Alonzo R; Pennisi C; Caponnetto A; Ferrara C; Stella M; Barbagallo C; Barbagallo D; Ragusa M; Purrello M; Di Pietro C
Int J Mol Sci; 2021 Dec; 22(24):. PubMed ID: 34947989
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]