These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

134 related articles for article (PubMed ID: 34978562)

  • 1. GPU-I-TASSER: a GPU accelerated I-TASSER protein structure prediction tool.
    MacCarthy EA; Zhang C; Zhang Y; Kc DB
    Bioinformatics; 2022 Mar; 38(6):1754-1755. PubMed ID: 34978562
    [TBL] [Abstract][Full Text] [Related]  

  • 2. I-TASSER server for protein 3D structure prediction.
    Zhang Y
    BMC Bioinformatics; 2008 Jan; 9():40. PubMed ID: 18215316
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Accelerated protein structure comparison using TM-score-GPU.
    Hung LH; Samudrala R
    Bioinformatics; 2012 Aug; 28(16):2191-2. PubMed ID: 22718788
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Ab initio modeling of small proteins by iterative TASSER simulations.
    Wu S; Skolnick J; Zhang Y
    BMC Biol; 2007 May; 5():17. PubMed ID: 17488521
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Template-based protein structure prediction in CASP11 and retrospect of I-TASSER in the last decade.
    Yang J; Zhang W; He B; Walker SE; Zhang H; Govindarajoo B; Virtanen J; Xue Z; Shen HB; Zhang Y
    Proteins; 2016 Sep; 84 Suppl 1(Suppl 1):233-46. PubMed ID: 26343917
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A new open-source GPU-based microscopic Monte Carlo simulation tool for the calculations of DNA damages caused by ionizing radiation --- Part I: Core algorithm and validation.
    Tsai MY; Tian Z; Qin N; Yan C; Lai Y; Hung SH; Chi Y; Jia X
    Med Phys; 2020 Apr; 47(4):1958-1970. PubMed ID: 31971258
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Parallel beamlet dose calculation via beamlet contexts in a distributed multi-GPU framework.
    Neph R; Ouyang C; Neylon J; Yang Y; Sheng K
    Med Phys; 2019 Aug; 46(8):3719-3733. PubMed ID: 31183871
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Ab initio protein structure prediction using chunk-TASSER.
    Zhou H; Skolnick J
    Biophys J; 2007 Sep; 93(5):1510-8. PubMed ID: 17496016
    [TBL] [Abstract][Full Text] [Related]  

  • 9. TASSER: an automated method for the prediction of protein tertiary structures in CASP6.
    Zhang Y; Arakaki AK; Skolnick J
    Proteins; 2005; 61 Suppl 7():91-98. PubMed ID: 16187349
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Graphics processing units-accelerated adaptive nonlocal means filter for denoising three-dimensional Monte Carlo photon transport simulations.
    Yuan Y; Yu L; Doğan Z; Fang Q
    J Biomed Opt; 2018 Nov; 23(12):1-9. PubMed ID: 30499265
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Protein structure prediction by pro-Sp3-TASSER.
    Zhou H; Skolnick J
    Biophys J; 2009 Mar; 96(6):2119-27. PubMed ID: 19289038
    [TBL] [Abstract][Full Text] [Related]  

  • 12. I-TASSER server: new development for protein structure and function predictions.
    Yang J; Zhang Y
    Nucleic Acids Res; 2015 Jul; 43(W1):W174-81. PubMed ID: 25883148
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Protein Structure and Function Prediction Using I-TASSER.
    Yang J; Zhang Y
    Curr Protoc Bioinformatics; 2015 Dec; 52():5.8.1-5.8.15. PubMed ID: 26678386
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Accelerated event-by-event Monte Carlo microdosimetric calculations of electrons and protons tracks on a multi-core CPU and a CUDA-enabled GPU.
    Kalantzis G; Tachibana H
    Comput Methods Programs Biomed; 2014; 113(1):116-25. PubMed ID: 24113420
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Analysis of TASSER-based CASP7 protein structure prediction results.
    Zhou H; Pandit SB; Lee SY; Borreguero J; Chen H; Wroblewska L; Skolnick J
    Proteins; 2007; 69 Suppl 8():90-7. PubMed ID: 17705276
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ARCHERRT - a GPU-based and photon-electron coupled Monte Carlo dose computing engine for radiation therapy: software development and application to helical tomotherapy.
    Su L; Yang Y; Bednarz B; Sterpin E; Du X; Liu T; Ji W; Xu XG
    Med Phys; 2014 Jul; 41(7):071709. PubMed ID: 24989378
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Automated protein structure modeling in CASP9 by I-TASSER pipeline combined with QUARK-based ab initio folding and FG-MD-based structure refinement.
    Xu D; Zhang J; Roy A; Zhang Y
    Proteins; 2011; 79 Suppl 10(Suppl 10):147-60. PubMed ID: 22069036
    [TBL] [Abstract][Full Text] [Related]  

  • 18. STRUM: structure-based prediction of protein stability changes upon single-point mutation.
    Quan L; Lv Q; Zhang Y
    Bioinformatics; 2016 Oct; 32(19):2936-46. PubMed ID: 27318206
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A protocol for computer-based protein structure and function prediction.
    Roy A; Xu D; Poisson J; Zhang Y
    J Vis Exp; 2011 Nov; (57):e3259. PubMed ID: 22082966
    [TBL] [Abstract][Full Text] [Related]  

  • 20. New capabilities of the Monte Carlo dose engine ARCHER-RT: Clinical validation of the Varian TrueBeam machine for VMAT external beam radiotherapy.
    Adam DP; Liu T; Caracappa PF; Bednarz BP; Xu XG
    Med Phys; 2020 Jun; 47(6):2537-2549. PubMed ID: 32175615
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.