These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

817 related articles for article (PubMed ID: 34980915)

  • 1. SignalP 6.0 predicts all five types of signal peptides using protein language models.
    Teufel F; Almagro Armenteros JJ; Johansen AR; Gíslason MH; Pihl SI; Tsirigos KD; Winther O; Brunak S; von Heijne G; Nielsen H
    Nat Biotechnol; 2022 Jul; 40(7):1023-1025. PubMed ID: 34980915
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SignalP 5.0 improves signal peptide predictions using deep neural networks.
    Almagro Armenteros JJ; Tsirigos KD; Sønderby CK; Petersen TN; Winther O; Brunak S; von Heijne G; Nielsen H
    Nat Biotechnol; 2019 Apr; 37(4):420-423. PubMed ID: 30778233
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model.
    Shen J; Yu Q; Chen S; Tan Q; Li J; Li Y
    Nat Comput Sci; 2024 Jan; 4(1):29-42. PubMed ID: 38177492
    [TBL] [Abstract][Full Text] [Related]  

  • 4. TSignal: a transformer model for signal peptide prediction.
    Dumitrescu A; Jokinen E; Paatero A; Kellosalo J; Paavilainen VO; Lähdesmäki H
    Bioinformatics; 2023 Jun; 39(39 Suppl 1):i347-i356. PubMed ID: 37387131
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Predicting Secretory Proteins with SignalP.
    Nielsen H
    Methods Mol Biol; 2017; 1611():59-73. PubMed ID: 28451972
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Machine learning approaches for the prediction of signal peptides and other protein sorting signals.
    Nielsen H; Brunak S; von Heijne G
    Protein Eng; 1999 Jan; 12(1):3-9. PubMed ID: 10065704
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Signal Peptides Generated by Attention-Based Neural Networks.
    Wu Z; Yang KK; Liszka MJ; Lee A; Batzilla A; Wernick D; Weiner DP; Arnold FH
    ACS Synth Biol; 2020 Aug; 9(8):2154-2161. PubMed ID: 32649182
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Secretory signal peptide modification for optimized antibody-fragment expression-secretion in Leishmania tarentolae.
    Klatt S; Konthur Z
    Microb Cell Fact; 2012 Jul; 11():97. PubMed ID: 22830363
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Signal peptide optimization tool for the secretion of recombinant protein from Saccharomyces cerevisiae.
    Mori A; Hara S; Sugahara T; Kojima T; Iwasaki Y; Kawarasaki Y; Sahara T; Ohgiya S; Nakano H
    J Biosci Bioeng; 2015 Nov; 120(5):518-25. PubMed ID: 25912446
    [TBL] [Abstract][Full Text] [Related]  

  • 10. In silico analysis of different signal peptides to discover a panel of appropriate signal peptides for secretory production of Interferon-beta 1b in Escherichia coli.
    Ghovvati S; Pezeshkian Z; Mirhoseini SZ
    Acta Biochim Pol; 2018 Oct; 65(4):521-534. PubMed ID: 30378597
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Computational prediction of the functional effects of amino acid substitutions in signal peptides using a model-based approach.
    Hon LS; Zhang Y; Kaminker JS; Zhang Z
    Hum Mutat; 2009 Jan; 30(1):99-106. PubMed ID: 18570327
    [TBL] [Abstract][Full Text] [Related]  

  • 12. [Computational analysis of signal peptide-dependent secreted protein in Caenorthaditis elegans ws123].
    Wu HZ; Li CY; Zhu YY; Bi YF
    Yi Chuan; 2006 Apr; 28(4):470-8. PubMed ID: 16606602
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Suitable Signal Peptides for Secretory Production of Recombinant Granulocyte Colony Stimulating Factor in Escherichia coli.
    Tehrani SS; Goodarzi G; Naghizadeh M; Khatami SH; Movahedpour A; Abbasi A; Shabaninejad Z; Khalaf N; Taheri-Anganeh M; Savardashtaki A
    Recent Pat Biotechnol; 2020; 14(4):269-282. PubMed ID: 32838727
    [TBL] [Abstract][Full Text] [Related]  

  • 14. In silico high throughput mutagenesis and screening of signal peptides to mitigate N-terminal heterogeneity of recombinant monoclonal antibodies.
    Yu X; Conyne M; Lake MR; Walter KA; Min J
    MAbs; 2022; 14(1):2044977. PubMed ID: 35275041
    [TBL] [Abstract][Full Text] [Related]  

  • 15. In silico Analysis of Different Signal Peptides for Secretory Production of Arginine Deiminase in Escherichia coli.
    Zarei M; Nezafat N; Morowvat MH; Ektefaie M; Ghasemi Y
    Recent Pat Biotechnol; 2019; 13(3):217-227. PubMed ID: 30621572
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A comprehensive assessment of N-terminal signal peptides prediction methods.
    Choo KH; Tan TW; Ranganathan S
    BMC Bioinformatics; 2009 Dec; 10 Suppl 15(Suppl 15):S2. PubMed ID: 19958512
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Structural analysis of fibroin heavy chain signal peptide of silkworm Bombyx mori.
    Wang SP; Guo TQ; Guo XY; Huang JT; Lu CD
    Acta Biochim Biophys Sin (Shanghai); 2006 Jul; 38(7):507-13. PubMed ID: 16820867
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evaluation of signal peptide prediction algorithms for identification of mycobacterial signal peptides using sequence data from proteomic methods.
    Leversen NA; de Souza GA; Målen H; Prasad S; Jonassen I; Wiker HG
    Microbiology (Reading); 2009 Jul; 155(Pt 7):2375-2383. PubMed ID: 19389770
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Improving Signal and Transit Peptide Predictions Using AlphaFold2-predicted Protein Structures.
    Sanaboyana VR; Elcock AH
    J Mol Biol; 2024 Jan; 436(2):168393. PubMed ID: 38065275
    [TBL] [Abstract][Full Text] [Related]  

  • 20. [Analysis of signal peptides of the secreted proteins in Ralstonia solanacearum GMI1000].
    Huang JL; Wu JZ; Xiao CG; Li CJ; Wang GX
    Yi Chuan; 2007 Nov; 29(11):1409-16. PubMed ID: 17989054
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 41.