121 related articles for article (PubMed ID: 34985087)
1. A bifunctional chemical signature enabling RNA 4-thiouridine enrichment sequencing with single-base resolution.
Su L; Zhao F; Yu H; Bai M; Xue J; Cao X; Chen F; Zhao Y
Chem Commun (Camb); 2022 Jan; 58(9):1322-1325. PubMed ID: 34985087
[TBL] [Abstract][Full Text] [Related]
2. Osmium-Mediated Transformation of 4-Thiouridine to Cytidine as Key To Study RNA Dynamics by Sequencing.
Riml C; Amort T; Rieder D; Gasser C; Lusser A; Micura R
Angew Chem Int Ed Engl; 2017 Oct; 56(43):13479-13483. PubMed ID: 28817234
[TBL] [Abstract][Full Text] [Related]
3. Addition-Elimination Mechanism-Activated Nucleotide Transition Sequencing for RNA Dynamics Profiling.
Su L; Chen F; Yu H; Yan H; Zhao F; Fan C; Zhao Y
Anal Chem; 2021 Oct; 93(41):13974-13980. PubMed ID: 34612623
[TBL] [Abstract][Full Text] [Related]
4. Thiouridine-to-Cytidine Conversion Sequencing (TUC-Seq) to Measure mRNA Transcription and Degradation Rates.
Lusser A; Gasser C; Trixl L; Piatti P; Delazer I; Rieder D; Bashin J; Riml C; Amort T; Micura R
Methods Mol Biol; 2020; 2062():191-211. PubMed ID: 31768978
[TBL] [Abstract][Full Text] [Related]
5. Metabolic Labeling of Newly Synthesized RNA with 4sU to in Parallel Assess RNA Transcription and Decay.
Sun W; Chen W
Methods Mol Biol; 2018; 1720():25-34. PubMed ID: 29236249
[TBL] [Abstract][Full Text] [Related]
6. Global analysis of RNA metabolism using bio-orthogonal labeling coupled with next-generation RNA sequencing.
Wolfe MB; Goldstrohm AC; Freddolino PL
Methods; 2019 Feb; 155():88-103. PubMed ID: 30529548
[TBL] [Abstract][Full Text] [Related]
7. Universal and strain specific structure features of segment 8 genomic RNA of influenza A virus-application of 4-thiouridine photocrosslinking.
Soszynska-Jozwiak M; Pszczola M; Piasecka J; Peterson JM; Moss WN; Taras-Goslinska K; Kierzek R; Kierzek E
J Biol Chem; 2021 Dec; 297(6):101245. PubMed ID: 34688660
[TBL] [Abstract][Full Text] [Related]
8. The influence of 4-thiouridine labeling on pre-mRNA splicing outcomes.
Altieri JAC; Hertel KJ
PLoS One; 2021; 16(12):e0257503. PubMed ID: 34898625
[TBL] [Abstract][Full Text] [Related]
9. A Nonradioactive Assay to Measure Production and Processing of Ribosomal RNA by 4sU-Tagging.
Burger K; Eick D
Methods Mol Biol; 2016; 1455():121-31. PubMed ID: 27576715
[TBL] [Abstract][Full Text] [Related]
10. Synergising single-cell resolution and 4sU labelling boosts inference of transcriptional bursting.
Edwards DM; Davies P; Hebenstreit D
Genome Biol; 2023 Jun; 24(1):138. PubMed ID: 37328900
[TBL] [Abstract][Full Text] [Related]
11. A non-radioactive, improved PAR-CLIP and small RNA cDNA library preparation protocol.
Anastasakis DG; Jacob A; Konstantinidou P; Meguro K; Claypool D; Cekan P; Haase AD; Hafner M
Nucleic Acids Res; 2021 May; 49(8):e45. PubMed ID: 33503264
[TBL] [Abstract][Full Text] [Related]
12. Ultrashort and progressive 4sU-tagging reveals key characteristics of RNA processing at nucleotide resolution.
Windhager L; Bonfert T; Burger K; Ruzsics Z; Krebs S; Kaufmann S; Malterer G; L'Hernault A; Schilhabel M; Schreiber S; Rosenstiel P; Zimmer R; Eick D; Friedel CC; Dölken L
Genome Res; 2012 Oct; 22(10):2031-42. PubMed ID: 22539649
[TBL] [Abstract][Full Text] [Related]
13. Measuring Transcription Rate Changes via Time-Course 4-Thiouridine Pulse-Labelling Improves Transcriptional Target Identification.
Schwarzl T; Higgins DG; Kolch W; Duffy DJ
J Mol Biol; 2015 Oct; 427(21):3368-74. PubMed ID: 26362006
[TBL] [Abstract][Full Text] [Related]
14. TimeLapse-seq: adding a temporal dimension to RNA sequencing through nucleoside recoding.
Schofield JA; Duffy EE; Kiefer L; Sullivan MC; Simon MD
Nat Methods; 2018 Mar; 15(3):221-225. PubMed ID: 29355846
[TBL] [Abstract][Full Text] [Related]
15. 4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response.
Burger K; Mühl B; Kellner M; Rohrmoser M; Gruber-Eber A; Windhager L; Friedel CC; Dölken L; Eick D
RNA Biol; 2013 Oct; 10(10):1623-30. PubMed ID: 24025460
[TBL] [Abstract][Full Text] [Related]
16. Uncovering the Stability of Mature miRNAs by 4-Thio-Uridine Metabolic Labeling.
Marzi MJ; Nicassio F
Methods Mol Biol; 2018; 1823():141-152. PubMed ID: 29959679
[TBL] [Abstract][Full Text] [Related]
17. Measuring mRNA Decay with Roadblock-qPCR.
Watson MJ; Thoreen CC
Curr Protoc; 2022 Jan; 2(1):e344. PubMed ID: 35041257
[TBL] [Abstract][Full Text] [Related]
18. Metabolic labeling and recovery of nascent RNA to accurately quantify mRNA stability.
Russo J; Heck AM; Wilusz J; Wilusz CJ
Methods; 2017 May; 120():39-48. PubMed ID: 28219744
[TBL] [Abstract][Full Text] [Related]
19. Metabolic labeling of newly transcribed RNA for high resolution gene expression profiling of RNA synthesis, processing and decay in cell culture.
Rädle B; Rutkowski AJ; Ruzsics Z; Friedel CC; Koszinowski UH; Dölken L
J Vis Exp; 2013 Aug; (78):. PubMed ID: 23963265
[TBL] [Abstract][Full Text] [Related]
20. Isolation of Newly Transcribed RNA Using the Metabolic Label 4-Thiouridine.
Garibaldi A; Carranza F; Hertel KJ
Methods Mol Biol; 2017; 1648():169-176. PubMed ID: 28766297
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
