These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Halo-seq: An RNA Proximity Labeling Method for the Isolation and Analysis of Subcellular RNA Populations. Lo HG; Engel KL; Goering R; Li Y; Spitale RC; Taliaferro JM Curr Protoc; 2022 May; 2(5):e424. PubMed ID: 35532287 [TBL] [Abstract][Full Text] [Related]
3. Proximity-CLIP Provides a Snapshot of Protein-Occupied RNA Elements at Subcellular Resolution and Transcriptome-Wide Scale. Benhalevy D; Hafner M Methods Mol Biol; 2020; 2166():283-305. PubMed ID: 32710416 [TBL] [Abstract][Full Text] [Related]
4. Single-neuron isolation for RNA analysis using pipette capture and laser capture microdissection. Lovatt D; Bell T; Eberwine J Cold Spring Harb Protoc; 2015 Jan; 2015(1):pdb.prot072439. PubMed ID: 25561613 [TBL] [Abstract][Full Text] [Related]
5. Subcellular Spatial Transcriptomes: Emerging Frontier for Understanding Gene Regulation. Fazal FM; Chang HY Cold Spring Harb Symp Quant Biol; 2019; 84():31-45. PubMed ID: 32482897 [TBL] [Abstract][Full Text] [Related]
7. Classical and emerging techniques to identify and quantify localized RNAs. Taliaferro JM Wiley Interdiscip Rev RNA; 2019 Sep; 10(5):e1542. PubMed ID: 31044542 [TBL] [Abstract][Full Text] [Related]
8. An Optimized Protocol of Laser Capture Microdissection for Tissue-Specific RNA Profiling in a Radish Tap Root. Choe G; Hoang NV; Lee JY STAR Protoc; 2020 Dec; 1(3):100110. PubMed ID: 33377006 [TBL] [Abstract][Full Text] [Related]
9. Laser-Capture Microdissection of Maize Kernel Compartments for RNA-Seq-Based Expression Analysis. Zhang S; Thakare D; Yadegari R Methods Mol Biol; 2018; 1676():153-163. PubMed ID: 28986909 [TBL] [Abstract][Full Text] [Related]
10. Genome-wide analysis of RNA and protein localization and local translation in mESC-derived neurons. Ludwik KA; von Kuegelgen N; Chekulaeva M Methods; 2019 Jun; 162-163():31-41. PubMed ID: 30742998 [TBL] [Abstract][Full Text] [Related]
11. Comprehensive catalog of dendritically localized mRNA isoforms from sub-cellular sequencing of single mouse neurons. Middleton SA; Eberwine J; Kim J BMC Biol; 2019 Jan; 17(1):5. PubMed ID: 30678683 [TBL] [Abstract][Full Text] [Related]
12. Dawn of the in vivo RNA structurome and interactome. Kwok CK Biochem Soc Trans; 2016 Oct; 44(5):1395-1410. PubMed ID: 27911722 [TBL] [Abstract][Full Text] [Related]
13. Mechanisms and consequences of subcellular RNA localization across diverse cell types. Engel KL; Arora A; Goering R; Lo HG; Taliaferro JM Traffic; 2020 Jun; 21(6):404-418. PubMed ID: 32291836 [TBL] [Abstract][Full Text] [Related]
14. Proximity-CLIP provides a snapshot of protein-occupied RNA elements in subcellular compartments. Benhalevy D; Anastasakis DG; Hafner M Nat Methods; 2018 Dec; 15(12):1074-1082. PubMed ID: 30478324 [TBL] [Abstract][Full Text] [Related]
15. Computational Analysis of RNA-Protein Interactions via Deep Sequencing. Li L; Förstner KU; Chao Y Methods Mol Biol; 2018; 1751():171-182. PubMed ID: 29508297 [TBL] [Abstract][Full Text] [Related]
16. Laser Capture Microdissection of Tissue Sections for High-Throughput RNA Analysis. Hoffmann J; Wilhelm J; Kwapiszewska G Methods Mol Biol; 2017; 1627():325-340. PubMed ID: 28836211 [TBL] [Abstract][Full Text] [Related]
17. A strategy to capture and characterize the synaptic transcriptome. Puthanveettil SV; Antonov I; Kalachikov S; Rajasethupathy P; Choi YB; Kohn AB; Citarella M; Yu F; Karl KA; Kinet M; Morozova I; Russo JJ; Ju J; Moroz LL; Kandel ER Proc Natl Acad Sci U S A; 2013 Apr; 110(18):7464-9. PubMed ID: 23589870 [TBL] [Abstract][Full Text] [Related]
18. In Vivo Interrogation of the Hypoxic Transcriptome of Solid Tumors: Optimizing Hypoxic Probe Labeling with Laser Capture Microdissection for Isolation of High-Quality RNA for Deep Sequencing Analysis. Brady LK; Popov V; Koumenis C Adv Exp Med Biol; 2016; 899():41-58. PubMed ID: 27325261 [TBL] [Abstract][Full Text] [Related]
20. Characterization of the nuclear and cytosolic transcriptomes in human brain tissue reveals new insights into the subcellular distribution of RNA transcripts. Zaghlool A; Niazi A; Björklund ÅK; Westholm JO; Ameur A; Feuk L Sci Rep; 2021 Feb; 11(1):4076. PubMed ID: 33603054 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]