217 related articles for article (PubMed ID: 35012468)
1. Long read sequencing reveals novel isoforms and insights into splicing regulation during cell state changes.
Wright DJ; Hall NAL; Irish N; Man AL; Glynn W; Mould A; Angeles AL; Angiolini E; Swarbreck D; Gharbi K; Tunbridge EM; Haerty W
BMC Genomics; 2022 Jan; 23(1):42. PubMed ID: 35012468
[TBL] [Abstract][Full Text] [Related]
2. Long read transcript profiling of ion channel splice isoforms.
Hall NAL; Husain SM; Lee H; Tunbridge EM
Methods Enzymol; 2021; 654():345-364. PubMed ID: 34120721
[TBL] [Abstract][Full Text] [Related]
3. Comprehensive characterization of single-cell full-length isoforms in human and mouse with long-read sequencing.
Tian L; Jabbari JS; Thijssen R; Gouil Q; Amarasinghe SL; Voogd O; Kariyawasam H; Du MRM; Schuster J; Wang C; Su S; Dong X; Law CW; Lucattini A; Prawer YDJ; Collar-Fernández C; Chung JD; Naim T; Chan A; Ly CH; Lynch GS; Ryall JG; Anttila CJA; Peng H; Anderson MA; Flensburg C; Majewski I; Roberts AW; Huang DCS; Clark MB; Ritchie ME
Genome Biol; 2021 Nov; 22(1):310. PubMed ID: 34763716
[TBL] [Abstract][Full Text] [Related]
4. Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing.
Leung SK; Jeffries AR; Castanho I; Jordan BT; Moore K; Davies JP; Dempster EL; Bray NJ; O'Neill P; Tseng E; Ahmed Z; Collier DA; Jeffery ED; Prabhakar S; Schalkwyk L; Jops C; Gandal MJ; Sheynkman GM; Hannon E; Mill J
Cell Rep; 2021 Nov; 37(7):110022. PubMed ID: 34788620
[TBL] [Abstract][Full Text] [Related]
5. Developmental isoform diversity in the human neocortex informs neuropsychiatric risk mechanisms.
Patowary A; Zhang P; Jops C; Vuong CK; Ge X; Hou K; Kim M; Gong N; Margolis M; Vo D; Wang X; Liu C; Pasaniuc B; Li JJ; Gandal MJ; de la Torre-Ubieta L
bioRxiv; 2023 Oct; ():. PubMed ID: 36993726
[TBL] [Abstract][Full Text] [Related]
6. Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection.
Nguyen Quang N; Goudey S; Ségéral E; Mohammad A; Lemoine S; Blugeon C; Versapuech M; Paillart JC; Berlioz-Torrent C; Emiliani S; Gallois-Montbrun S
Retrovirology; 2020 Aug; 17(1):25. PubMed ID: 32807178
[TBL] [Abstract][Full Text] [Related]
7. Improving nanopore read accuracy with the R2C2 method enables the sequencing of highly multiplexed full-length single-cell cDNA.
Volden R; Palmer T; Byrne A; Cole C; Schmitz RJ; Green RE; Vollmers C
Proc Natl Acad Sci U S A; 2018 Sep; 115(39):9726-9731. PubMed ID: 30201725
[TBL] [Abstract][Full Text] [Related]
8. Exploring differential exon usage via short- and long-read RNA sequencing strategies.
Leshkowitz D; Kedmi M; Fried Y; Pilzer D; Keren-Shaul H; Ainbinder E; Dassa B
Open Biol; 2022 Sep; 12(9):220206. PubMed ID: 36168804
[TBL] [Abstract][Full Text] [Related]
9. Identification of Protein Isoforms Using Reference Databases Built from Long and Short Read RNA-Sequencing.
Tay AP; Hamey JJ; Martyn GE; Wilson LOW; Wilkins MR
J Proteome Res; 2022 Jul; 21(7):1628-1639. PubMed ID: 35612954
[TBL] [Abstract][Full Text] [Related]
10. Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome.
Tilgner H; Jahanbani F; Gupta I; Collier P; Wei E; Rasmussen M; Snyder M
Genome Res; 2018 Feb; 28(2):231-242. PubMed ID: 29196558
[TBL] [Abstract][Full Text] [Related]
11. Accurate expression quantification from nanopore direct RNA sequencing with NanoCount.
Gleeson J; Leger A; Prawer YDJ; Lane TA; Harrison PJ; Haerty W; Clark MB
Nucleic Acids Res; 2022 Feb; 50(4):e19. PubMed ID: 34850115
[TBL] [Abstract][Full Text] [Related]
12. Direct Nanopore Sequencing of mRNA Reveals Landscape of Transcript Isoforms in Apicomplexan Parasites.
Lee VV; Judd LM; Jex AR; Holt KE; Tonkin CJ; Ralph SA
mSystems; 2021 Mar; 6(2):. PubMed ID: 33688018
[TBL] [Abstract][Full Text] [Related]
13. Long-read sequencing reveals the complex splicing profile of the psychiatric risk gene CACNA1C in human brain.
Clark MB; Wrzesinski T; Garcia AB; Hall NAL; Kleinman JE; Hyde T; Weinberger DR; Harrison PJ; Haerty W; Tunbridge EM
Mol Psychiatry; 2020 Jan; 25(1):37-47. PubMed ID: 31695164
[TBL] [Abstract][Full Text] [Related]
14. Long-read sequencing for 29 immune cell subsets reveals disease-linked isoforms.
Inamo J; Suzuki A; Ueda MT; Yamaguchi K; Nishida H; Suzuki K; Kaneko Y; Takeuchi T; Hatano H; Ishigaki K; Ishihama Y; Yamamoto K; Kochi Y
Nat Commun; 2024 May; 15(1):4285. PubMed ID: 38806455
[TBL] [Abstract][Full Text] [Related]
15. Transcript Identification Through Long-Read Sequencing.
Seki M; Oka M; Xu L; Suzuki A; Suzuki Y
Methods Mol Biol; 2021; 2284():531-541. PubMed ID: 33835462
[TBL] [Abstract][Full Text] [Related]
16. Long read isoform sequencing reveals hidden transcriptional complexity between cattle subspecies.
Ren Y; Tseng E; Smith TPL; Hiendleder S; Williams JL; Low WY
BMC Genomics; 2023 Mar; 24(1):108. PubMed ID: 36915055
[TBL] [Abstract][Full Text] [Related]
17. Nanopore long-read RNA sequencing reveals functional alternative splicing variants in human vascular smooth muscle cells.
Wu H; Lu Y; Duan Z; Wu J; Lin M; Wu Y; Han S; Li T; Fan Y; Hu X; Xiao H; Feng J; Lu Z; Kong D; Li S
Commun Biol; 2023 Oct; 6(1):1104. PubMed ID: 37907652
[TBL] [Abstract][Full Text] [Related]
18. Nanopore sequencing of full-length BRCA1 mRNA transcripts reveals co-occurrence of known exon skipping events.
de Jong LC; Cree S; Lattimore V; Wiggins GAR; Spurdle AB; ; Miller A; Kennedy MA; Walker LC
Breast Cancer Res; 2017 Nov; 19(1):127. PubMed ID: 29183387
[TBL] [Abstract][Full Text] [Related]
19. Transcript Profiling Using Long-Read Sequencing Technologies.
Bayega A; Wang YC; Oikonomopoulos S; Djambazian H; Fahiminiya S; Ragoussis J
Methods Mol Biol; 2018; 1783():121-147. PubMed ID: 29767360
[TBL] [Abstract][Full Text] [Related]
20. Single-cell characterization of CRISPR-modified transcript isoforms with nanopore sequencing.
Kim HS; Grimes SM; Hooker AC; Lau BT; Ji HP
Genome Biol; 2021 Dec; 22(1):331. PubMed ID: 34872615
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
