241 related articles for article (PubMed ID: 35071053)
1. MinION™ Nanopore Sequencing of Skin Microbiome 16S and 16S-23S rRNA Gene Amplicons.
Rozas M; Brillet F; Callewaert C; Paetzold B
Front Cell Infect Microbiol; 2021; 11():806476. PubMed ID: 35071053
[TBL] [Abstract][Full Text] [Related]
2. Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution.
Matsuo Y; Komiya S; Yasumizu Y; Yasuoka Y; Mizushima K; Takagi T; Kryukov K; Fukuda A; Morimoto Y; Naito Y; Okada H; Bono H; Nakagawa S; Hirota K
BMC Microbiol; 2021 Jan; 21(1):35. PubMed ID: 33499799
[TBL] [Abstract][Full Text] [Related]
3. Microbiota profiling with long amplicons using Nanopore sequencing: full-length 16S rRNA gene and the 16S-ITS-23S of the
Cuscó A; Catozzi C; Viñes J; Sanchez A; Francino O
F1000Res; 2018; 7():1755. PubMed ID: 30815250
[No Abstract] [Full Text] [Related]
4. Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota.
Heikema AP; Horst-Kreft D; Boers SA; Jansen R; Hiltemann SD; de Koning W; Kraaij R; de Ridder MAJ; van Houten CB; Bont LJ; Stubbs AP; Hays JP
Genes (Basel); 2020 Sep; 11(9):. PubMed ID: 32967250
[TBL] [Abstract][Full Text] [Related]
5. Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer.
Benítez-Páez A; Portune KJ; Sanz Y
Gigascience; 2016; 5():4. PubMed ID: 26823973
[TBL] [Abstract][Full Text] [Related]
6. Long-read MinION™ sequencing of 16S and 16S-ITS-23S rRNA genes provides species-level resolution of
Olivier SA; Bull MK; Strube ML; Murphy R; Ross T; Bowman JP; Chapman B
Front Microbiol; 2023; 14():1290756. PubMed ID: 38143859
[TBL] [Abstract][Full Text] [Related]
7. Microbial Identification Using rRNA Operon Region: Database and Tool for Metataxonomics with Long-Read Sequence.
Seol D; Lim JS; Sung S; Lee YH; Jeong M; Cho S; Kwak W; Kim H
Microbiol Spectr; 2022 Apr; 10(2):e0201721. PubMed ID: 35352997
[TBL] [Abstract][Full Text] [Related]
8. The newest Oxford Nanopore R10.4.1 full-length 16S rRNA sequencing enables the accurate resolution of species-level microbial community profiling.
Zhang T; Li H; Ma S; Cao J; Liao H; Huang Q; Chen W
Appl Environ Microbiol; 2023 Oct; 89(10):e0060523. PubMed ID: 37800969
[TBL] [Abstract][Full Text] [Related]
9. Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes.
Earl JP; Adappa ND; Krol J; Bhat AS; Balashov S; Ehrlich RL; Palmer JN; Workman AD; Blasetti M; Sen B; Hammond J; Cohen NA; Ehrlich GD; Mell JC
Microbiome; 2018 Oct; 6(1):190. PubMed ID: 30352611
[TBL] [Abstract][Full Text] [Related]
10. Full-Length 16S rRNA Gene Analysis Using Long-Read Nanopore Sequencing for Rapid Identification of Bacteria from Clinical Specimens.
Matsuo Y
Methods Mol Biol; 2023; 2632():193-213. PubMed ID: 36781730
[TBL] [Abstract][Full Text] [Related]
11. Rapid bacterial identification by direct PCR amplification of 16S rRNA genes using the MinION™ nanopore sequencer.
Kai S; Matsuo Y; Nakagawa S; Kryukov K; Matsukawa S; Tanaka H; Iwai T; Imanishi T; Hirota K
FEBS Open Bio; 2019 Mar; 9(3):548-557. PubMed ID: 30868063
[TBL] [Abstract][Full Text] [Related]
12. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
[TBL] [Abstract][Full Text] [Related]
13. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
[TBL] [Abstract][Full Text] [Related]
14. Improved DNA Extraction and Amplification Strategy for 16S rRNA Gene Amplicon-Based Microbiome Studies.
Hong BY; Driscoll M; Gratalo D; Jarvie T; Weinstock GM
Int J Mol Sci; 2024 Mar; 25(5):. PubMed ID: 38474213
[TBL] [Abstract][Full Text] [Related]
15. Bacterial and viral identification and differentiation by amplicon sequencing on the MinION nanopore sequencer.
Kilianski A; Haas JL; Corriveau EJ; Liem AT; Willis KL; Kadavy DR; Rosenzweig CN; Minot SS
Gigascience; 2015; 4():12. PubMed ID: 25815165
[TBL] [Abstract][Full Text] [Related]
16. Emu: species-level microbial community profiling of full-length 16S rRNA Oxford Nanopore sequencing data.
Curry KD; Wang Q; Nute MG; Tyshaieva A; Reeves E; Soriano S; Wu Q; Graeber E; Finzer P; Mendling W; Savidge T; Villapol S; Dilthey A; Treangen TJ
Nat Methods; 2022 Jul; 19(7):845-853. PubMed ID: 35773532
[TBL] [Abstract][Full Text] [Related]
17. Nanopore Sequencing Using the Full-Length 16S rRNA Gene for Detection of Blood-Borne Bacteria in Dogs Reveals a Novel Species of Hemotropic Mycoplasma.
Huggins LG; Colella V; Atapattu U; Koehler AV; Traub RJ
Microbiol Spectr; 2022 Dec; 10(6):e0308822. PubMed ID: 36250862
[TBL] [Abstract][Full Text] [Related]
18. A comparison between full-length 16S rRNA Oxford nanopore sequencing and Illumina V3-V4 16S rRNA sequencing in head and neck cancer tissues.
Yeo K; Connell J; Bouras G; Smith E; Murphy W; Hodge JC; Krishnan S; Wormald PJ; Valentine R; Psaltis AJ; Vreugde S; Fenix KA
Arch Microbiol; 2024 May; 206(6):248. PubMed ID: 38713383
[TBL] [Abstract][Full Text] [Related]
19. Establishment and assessment of an amplicon sequencing method targeting the 16S-ITS-23S rRNA operon for analysis of the equine gut microbiome.
Kinoshita Y; Niwa H; Uchida-Fujii E; Nukada T
Sci Rep; 2021 Jun; 11(1):11884. PubMed ID: 34088956
[TBL] [Abstract][Full Text] [Related]
20. Optimized bacterial community characterization through full-length 16S rRNA gene sequencing utilizing MinION nanopore technology.
Bertolo A; Valido E; Stoyanov J
BMC Microbiol; 2024 Feb; 24(1):58. PubMed ID: 38365589
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
