182 related articles for article (PubMed ID: 35085783)
1. Comparison of Illumina and Oxford Nanopore Sequencing Technologies for Pathogen Detection from Clinical Matrices Using Molecular Inversion Probes.
Stefan CP; Hall AT; Graham AS; Minogue TD
J Mol Diagn; 2022 Apr; 24(4):395-405. PubMed ID: 35085783
[TBL] [Abstract][Full Text] [Related]
2. Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota.
Heikema AP; Horst-Kreft D; Boers SA; Jansen R; Hiltemann SD; de Koning W; Kraaij R; de Ridder MAJ; van Houten CB; Bont LJ; Stubbs AP; Hays JP
Genes (Basel); 2020 Sep; 11(9):. PubMed ID: 32967250
[TBL] [Abstract][Full Text] [Related]
3. Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Bogaerts B; Van den Bossche A; Verhaegen B; Delbrassinne L; Mattheus W; Nouws S; Godfroid M; Hoffman S; Roosens NHC; De Keersmaecker SCJ; Vanneste K
J Clin Microbiol; 2024 May; 62(5):e0157623. PubMed ID: 38441926
[TBL] [Abstract][Full Text] [Related]
4. Recovery of small plasmid sequences via Oxford Nanopore sequencing.
Wick RR; Judd LM; Wyres KL; Holt KE
Microb Genom; 2021 Aug; 7(8):. PubMed ID: 34431763
[TBL] [Abstract][Full Text] [Related]
5. Comparison of Illumina and Oxford Nanopore Technology for genome analysis of Francisella tularensis, Bacillus anthracis, and Brucella suis.
Linde J; Brangsch H; Hölzer M; Thomas C; Elschner MC; Melzer F; Tomaso H
BMC Genomics; 2023 May; 24(1):258. PubMed ID: 37173617
[TBL] [Abstract][Full Text] [Related]
6. An evolution of Nanopore next-generation sequencing technology: implications for medical microbiology and public health.
Mostafa HH
J Clin Microbiol; 2024 May; 62(5):e0024624. PubMed ID: 38563782
[TBL] [Abstract][Full Text] [Related]
7. Identifying Bacterial Airways Infection in Stable Severe Asthma Using Oxford Nanopore Sequencing Technologies.
Jabeen MF; Sanderson ND; Foster D; Crook DW; Cane JL; Borg C; Connolly C; Thulborn S; Pavord ID; Klenerman P; Street TL; Hinks TSC
Microbiol Spectr; 2022 Apr; 10(2):e0227921. PubMed ID: 35323032
[TBL] [Abstract][Full Text] [Related]
8. TARGETING THE 16S RRNA GENE FOR BACTERIAL IDENTIFICATION IN COMPLEX MIXED SAMPLES: COMPARATIVE EVALUATION OF SECOND (ILLUMINA) AND THIRD (OXFORD NANOPORE TECHNOLOGIES) GENERATION SEQUENCING TECHNOLOGIES.
Winand R; Bogaerts B; Hoffman S; Lefevre L; Delvoye M; Braekel JV; Fu Q; Roosens NH; Keersmaecker SC; Vanneste K
Int J Mol Sci; 2019 Dec; 21(1):. PubMed ID: 31906254
[TBL] [Abstract][Full Text] [Related]
9. Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants.
Riaz N; Leung P; Barton K; Smith MA; Carswell S; Bull R; Lloyd AR; Rodrigo C
BMC Genomics; 2021 Mar; 22(1):148. PubMed ID: 33653280
[TBL] [Abstract][Full Text] [Related]
10. Subtyping Evaluation of
Xian Z; Li S; Mann DA; Huang Y; Xu F; Wu X; Tang S; Zhang G; Stevenson A; Ge C; Deng X
Appl Environ Microbiol; 2022 Aug; 88(15):e0078522. PubMed ID: 35867567
[TBL] [Abstract][Full Text] [Related]
11. Application of Nanopore-Based Sequencing to Identify Virus Infections in Woody Plants.
Amoia SS; Chiumenti M; Minafra A
Methods Mol Biol; 2024; 2732():265-278. PubMed ID: 38060131
[TBL] [Abstract][Full Text] [Related]
12. Field-based detection of bacteria using nanopore sequencing: Method evaluation for biothreat detection in complex samples.
Tyler AD; McAllister J; Stapleton H; Gauci P; Antonation K; Thirkettle-Watts D; Corbett CR
PLoS One; 2023; 18(11):e0295028. PubMed ID: 38015952
[TBL] [Abstract][Full Text] [Related]
13. Comparison of the performance of an amplicon sequencing assay based on Oxford Nanopore technology to real-time PCR assays for detecting bacterial biodefense pathogens.
Player R; Verratti K; Staab A; Bradburne C; Grady S; Goodwin B; Sozhamannan S
BMC Genomics; 2020 Feb; 21(1):166. PubMed ID: 32066372
[TBL] [Abstract][Full Text] [Related]
14. Illumina and Nanopore sequencing in culture-negative samples from suspected lower respiratory tract infection patients.
Ma L; Zhu C; Yan T; Hu Y; Zhou J; Li Y; Du F; Zhou J
Front Cell Infect Microbiol; 2024; 14():1230650. PubMed ID: 38638824
[TBL] [Abstract][Full Text] [Related]
15. Metabarcoding using nanopore long-read sequencing for the unbiased characterization of apicomplexan haemoparasites.
Huggins LG; Colella V; Young ND; Traub RJ
Mol Ecol Resour; 2024 Feb; 24(2):e13878. PubMed ID: 37837372
[TBL] [Abstract][Full Text] [Related]
16. Technical note: overcoming host contamination in bovine vaginal metagenomic samples with nanopore adaptive sequencing.
Ong CT; Ross EM; Boe-Hansen GB; Turni C; Hayes BJ; Tabor AE
J Anim Sci; 2022 Jan; 100(1):. PubMed ID: 34791313
[TBL] [Abstract][Full Text] [Related]
17. Nanopore and Illumina sequencing reveal different viral populations from human gut samples.
Cook R; Telatin A; Hsieh SY; Newberry F; Tariq MA; Baker DJ; Carding SR; Adriaenssens EM
Microb Genom; 2024 Apr; 10(4):. PubMed ID: 38683195
[TBL] [Abstract][Full Text] [Related]
18. Sequencing Illumina libraries at high accuracy on the ONT MinION using R2C2.
Zee A; Deng DZQ; Adams M; Schimke KD; Corbett-Detig R; Russell SL; Zhang X; Schmitz RJ; Vollmers C
Genome Res; 2022; 32(11-12):2092-2106. PubMed ID: 36351772
[TBL] [Abstract][Full Text] [Related]
19. Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies.
Sevim V; Lee J; Egan R; Clum A; Hundley H; Lee J; Everroad RC; Detweiler AM; Bebout BM; Pett-Ridge J; Göker M; Murray AE; Lindemann SR; Klenk HP; O'Malley R; Zane M; Cheng JF; Copeland A; Daum C; Singer E; Woyke T
Sci Data; 2019 Nov; 6(1):285. PubMed ID: 31772173
[TBL] [Abstract][Full Text] [Related]
20. Comparison of 6 DNA extraction methods for isolation of high yield of high molecular weight DNA suitable for shotgun metagenomics Nanopore sequencing to detect bacteria.
Gand M; Bloemen B; Vanneste K; Roosens NHC; De Keersmaecker SCJ
BMC Genomics; 2023 Aug; 24(1):438. PubMed ID: 37537550
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
