208 related articles for article (PubMed ID: 35150250)
1. PST-PRNA: prediction of RNA-binding sites using protein surface topography and deep learning.
Li P; Liu ZP
Bioinformatics; 2022 Apr; 38(8):2162-2168. PubMed ID: 35150250
[TBL] [Abstract][Full Text] [Related]
2. Prediction of protein-RNA binding sites by a random forest method with combined features.
Liu ZP; Wu LY; Wang Y; Zhang XS; Chen L
Bioinformatics; 2010 Jul; 26(13):1616-22. PubMed ID: 20483814
[TBL] [Abstract][Full Text] [Related]
3. Prediction of RNA-binding residues in proteins from primary sequence using an enriched random forest model with a novel hybrid feature.
Ma X; Guo J; Wu J; Liu H; Yu J; Xie J; Sun X
Proteins; 2011 Apr; 79(4):1230-9. PubMed ID: 21268114
[TBL] [Abstract][Full Text] [Related]
4. circRNA-binding protein site prediction based on multi-view deep learning, subspace learning and multi-view classifier.
Li H; Deng Z; Yang H; Pan X; Wei Z; Shen HB; Choi KS; Wang L; Wang S; Wu J
Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34571539
[TBL] [Abstract][Full Text] [Related]
5. Identification of RNA-binding sites in proteins by integrating various sequence information.
Wang CC; Fang Y; Xiao J; Li M
Amino Acids; 2011 Jan; 40(1):239-48. PubMed ID: 20549269
[TBL] [Abstract][Full Text] [Related]
6. RNA-binding protein recognition based on multi-view deep feature and multi-label learning.
Yang H; Deng Z; Pan X; Shen HB; Choi KS; Wang L; Wang S; Wu J
Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32808039
[TBL] [Abstract][Full Text] [Related]
7. Predicting RNA-protein binding sites and motifs through combining local and global deep convolutional neural networks.
Pan X; Shen HB
Bioinformatics; 2018 Oct; 34(20):3427-3436. PubMed ID: 29722865
[TBL] [Abstract][Full Text] [Related]
8. A deep learning framework for modeling structural features of RNA-binding protein targets.
Zhang S; Zhou J; Hu H; Gong H; Chen L; Cheng C; Zeng J
Nucleic Acids Res; 2016 Feb; 44(4):e32. PubMed ID: 26467480
[TBL] [Abstract][Full Text] [Related]
9. PreRBP-TL: prediction of species-specific RNA-binding proteins based on transfer learning.
Zhang J; Yan K; Chen Q; Liu B
Bioinformatics; 2022 Apr; 38(8):2135-2143. PubMed ID: 35176130
[TBL] [Abstract][Full Text] [Related]
10. Protein function annotation from sequence: prediction of residues interacting with RNA.
Spriggs RV; Murakami Y; Nakamura H; Jones S
Bioinformatics; 2009 Jun; 25(12):1492-7. PubMed ID: 19389733
[TBL] [Abstract][Full Text] [Related]
11. AIRBP: Accurate identification of RNA-binding proteins using machine learning techniques.
Mishra A; Khanal R; Kabir WU; Hoque T
Artif Intell Med; 2021 Mar; 113():102034. PubMed ID: 33685590
[TBL] [Abstract][Full Text] [Related]
12. Prediction of the RBP binding sites on lncRNAs using the high-order nucleotide encoding convolutional neural network.
Zhang SW; Wang Y; Zhang XX; Wang JQ
Anal Biochem; 2019 Oct; 583():113364. PubMed ID: 31323206
[TBL] [Abstract][Full Text] [Related]
13. Comprehensive review and assessment of computational methods for predicting RNA post-transcriptional modification sites from RNA sequences.
Chen Z; Zhao P; Li F; Wang Y; Smith AI; Webb GI; Akutsu T; Baggag A; Bensmail H; Song J
Brief Bioinform; 2020 Sep; 21(5):1676-1696. PubMed ID: 31714956
[TBL] [Abstract][Full Text] [Related]
14. RBPLight: a computational tool for discovery of plant-specific RNA-binding proteins using light gradient boosting machine and ensemble of evolutionary features.
Pradhan UK; Meher PK; Naha S; Pal S; Gupta S; Gupta A; Parsad R
Brief Funct Genomics; 2023 Nov; 22(5):401-410. PubMed ID: 37158175
[TBL] [Abstract][Full Text] [Related]
15. Prediction of RNA binding sites in a protein using SVM and PSSM profile.
Kumar M; Gromiha MM; Raghava GP
Proteins; 2008 Apr; 71(1):189-94. PubMed ID: 17932917
[TBL] [Abstract][Full Text] [Related]
16. RNA-protein binding motifs mining with a new hybrid deep learning based cross-domain knowledge integration approach.
Pan X; Shen HB
BMC Bioinformatics; 2017 Feb; 18(1):136. PubMed ID: 28245811
[TBL] [Abstract][Full Text] [Related]
17. Accurate prediction of RNA-binding protein residues with two discriminative structural descriptors.
Sun M; Wang X; Zou C; He Z; Liu W; Li H
BMC Bioinformatics; 2016 Jun; 17(1):231. PubMed ID: 27266516
[TBL] [Abstract][Full Text] [Related]
18. RBPsuite: RNA-protein binding sites prediction suite based on deep learning.
Pan X; Fang Y; Li X; Yang Y; Shen HB
BMC Genomics; 2020 Dec; 21(1):884. PubMed ID: 33297946
[TBL] [Abstract][Full Text] [Related]
19. Integrating thermodynamic and sequence contexts improves protein-RNA binding prediction.
Su Y; Luo Y; Zhao X; Liu Y; Peng J
PLoS Comput Biol; 2019 Sep; 15(9):e1007283. PubMed ID: 31483777
[TBL] [Abstract][Full Text] [Related]
20. Computational Prediction of RNA-Binding Proteins and Binding Sites.
Si J; Cui J; Cheng J; Wu R
Int J Mol Sci; 2015 Nov; 16(11):26303-17. PubMed ID: 26540053
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]