BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

348 related articles for article (PubMed ID: 35176018)

  • 21. Capture-based high-coverage NGS: a powerful tool to uncover a wide spectrum of mutation types.
    Wang J; Yu H; Zhang VW; Tian X; Feng Y; Wang G; Gorman E; Wang H; Lutz RE; Schmitt ES; Peacock S; Wong LJ
    Genet Med; 2016 May; 18(5):513-21. PubMed ID: 26402642
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Short and long-read genome sequencing methodologies for somatic variant detection; genomic analysis of a patient with diffuse large B-cell lymphoma.
    Roberts HE; Lopopolo M; Pagnamenta AT; Sharma E; Parkes D; Lonie L; Freeman C; Knight SJL; Lunter G; Dreau H; Lockstone H; Taylor JC; Schuh A; Bowden R; Buck D
    Sci Rep; 2021 Mar; 11(1):6408. PubMed ID: 33742045
    [TBL] [Abstract][Full Text] [Related]  

  • 23.
    Seah YM; Stewart MK; Hoogestraat D; Ryder M; Cookson BT; Salipante SJ; Hoffman NG
    J Clin Microbiol; 2023 Aug; 61(8):e0184222. PubMed ID: 37428072
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Identification of indels in next-generation sequencing data.
    Ratan A; Olson TL; Loughran TP; Miller W
    BMC Bioinformatics; 2015 Feb; 16(1):42. PubMed ID: 25879703
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Whole-genome sequencing is more powerful than whole-exome sequencing for detecting exome variants.
    Belkadi A; Bolze A; Itan Y; Cobat A; Vincent QB; Antipenko A; Shang L; Boisson B; Casanova JL; Abel L
    Proc Natl Acad Sci U S A; 2015 Apr; 112(17):5473-8. PubMed ID: 25827230
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Amplicon Indel Hunter Is a Novel Bioinformatics Tool to Detect Large Somatic Insertion/Deletion Mutations in Amplicon-Based Next-Generation Sequencing Data.
    Kadri S; Zhen CJ; Wurst MN; Long BC; Jiang ZF; Wang YL; Furtado LV; Segal JP
    J Mol Diagn; 2015 Nov; 17(6):635-43. PubMed ID: 26319364
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Analysis of pathogenic variants from the ClinVar database in healthy people using next-generation sequencing.
    Rančelis T; Arasimavičius J; Ambrozaitytė L; Kavaliauskienė I; Domarkienė I; Karčiauskaitė D; Kučinskienė ZA; Kučinskas V
    Genet Res (Camb); 2017 Aug; 99():e6. PubMed ID: 28851476
    [TBL] [Abstract][Full Text] [Related]  

  • 28. A comparative study of k-spectrum-based error correction methods for next-generation sequencing data analysis.
    Akogwu I; Wang N; Zhang C; Gong P
    Hum Genomics; 2016 Jul; 10 Suppl 2(Suppl 2):20. PubMed ID: 27461106
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Dindel: accurate indel calls from short-read data.
    Albers CA; Lunter G; MacArthur DG; McVean G; Ouwehand WH; Durbin R
    Genome Res; 2011 Jun; 21(6):961-73. PubMed ID: 20980555
    [TBL] [Abstract][Full Text] [Related]  

  • 30. TSETA: A Third-Generation Sequencing-Based Computational Tool for Mapping and Visualization of SNPs, Meiotic Recombination Products, and RIP Mutations.
    Liu HC; Li WC; Wang TF
    Methods Mol Biol; 2021; 2234():331-361. PubMed ID: 33165796
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Uncovering missed indels by leveraging unmapped reads.
    Hasan MS; Wu X; Zhang L
    Sci Rep; 2019 Jul; 9(1):11093. PubMed ID: 31366961
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Indel sensitive and comprehensive variant/mutation detection from RNA sequencing data for precision medicine.
    Prodduturi N; Bhagwate A; Kocher JA; Sun Z
    BMC Med Genomics; 2018 Sep; 11(Suppl 3):67. PubMed ID: 30255803
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Development of genome-wide insertion and deletion markers for maize, based on next-generation sequencing data.
    Liu J; Qu J; Yang C; Tang D; Li J; Lan H; Rong T
    BMC Genomics; 2015 Aug; 16(1):601. PubMed ID: 26269146
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Detection of minor variants in Mycobacterium tuberculosis whole genome sequencing data.
    Goossens SN; Heupink TH; De Vos E; Dippenaar A; De Vos M; Warren R; Van Rie A
    Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34962257
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Single-cell genome sequencing of human neurons identifies somatic point mutation and indel enrichment in regulatory elements.
    Luquette LJ; Miller MB; Zhou Z; Bohrson CL; Zhao Y; Jin H; Gulhan D; Ganz J; Bizzotto S; Kirkham S; Hochepied T; Libert C; Galor A; Kim J; Lodato MA; Garaycoechea JI; Gawad C; West J; Walsh CA; Park PJ
    Nat Genet; 2022 Oct; 54(10):1564-1571. PubMed ID: 36163278
    [TBL] [Abstract][Full Text] [Related]  

  • 36. NanoCaller for accurate detection of SNPs and indels in difficult-to-map regions from long-read sequencing by haplotype-aware deep neural networks.
    Ahsan MU; Liu Q; Fang L; Wang K
    Genome Biol; 2021 Sep; 22(1):261. PubMed ID: 34488830
    [TBL] [Abstract][Full Text] [Related]  

  • 37. iSVP: an integrated structural variant calling pipeline from high-throughput sequencing data.
    Mimori T; Nariai N; Kojima K; Takahashi M; Ono A; Sato Y; Yamaguchi-Kabata Y; Nagasaki M
    BMC Syst Biol; 2013; 7 Suppl 6(Suppl 6):S8. PubMed ID: 24564972
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Identification of genomic indels and structural variations using split reads.
    Zhang ZD; Du J; Lam H; Abyzov A; Urban AE; Snyder M; Gerstein M
    BMC Genomics; 2011 Jul; 12():375. PubMed ID: 21787423
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Towards accurate indel calling for oncopanel sequencing through an international pipeline competition at precisionFDA.
    Gong B; Lababidi S; Kusko R; Bouri K; Prezek S; Thovarai V; Prasanna A; Maier EJ; Golkaram M; Sun X; Kyriakidis K; Kitajima JP; Ebrahim Sahraeian SM; Guo Y; Johanson E; Jones W; Tong W; Xu J
    Sci Rep; 2024 Apr; 14(1):8165. PubMed ID: 38589653
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Variant callers for next-generation sequencing data: a comparison study.
    Liu X; Han S; Wang Z; Gelernter J; Yang BZ
    PLoS One; 2013; 8(9):e75619. PubMed ID: 24086590
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 18.