These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

121 related articles for article (PubMed ID: 35201762)

  • 1. Toward Compilation of Balanced Protein Stability Data Sets: Flattening the ΔΔ
    Kebabci N; Timucin AC; Timucin E
    J Chem Inf Model; 2022 Mar; 62(5):1345-1355. PubMed ID: 35201762
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A three-state prediction of single point mutations on protein stability changes.
    Capriotti E; Fariselli P; Rossi I; Casadio R
    BMC Bioinformatics; 2008 Mar; 9 Suppl 2(Suppl 2):S6. PubMed ID: 18387208
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Data set and fitting dependencies when estimating protein mutant stability: Toward simple, balanced, and interpretable models.
    Baek KT; Kepp KP
    J Comput Chem; 2022 Mar; 43(8):504-518. PubMed ID: 35040492
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Large scale analysis of protein stability in OMIM disease related human protein variants.
    Martelli PL; Fariselli P; Savojardo C; Babbi G; Aggazio F; Casadio R
    BMC Genomics; 2016 Jun; 17 Suppl 2(Suppl 2):397. PubMed ID: 27356511
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Performance of Web tools for predicting changes in protein stability caused by mutations.
    Marabotti A; Del Prete E; Scafuri B; Facchiano A
    BMC Bioinformatics; 2021 Jul; 22(Suppl 7):345. PubMed ID: 34225665
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Prediction of protein mutant stability using classification and regression tool.
    Huang LT; Saraboji K; Ho SY; Hwang SF; Ponnuswamy MN; Gromiha MM
    Biophys Chem; 2007 Feb; 125(2-3):462-70. PubMed ID: 17113702
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Predicting changes in protein thermodynamic stability upon point mutation with deep 3D convolutional neural networks.
    Li B; Yang YT; Capra JA; Gerstein MB
    PLoS Comput Biol; 2020 Nov; 16(11):e1008291. PubMed ID: 33253214
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Selection maintaining protein stability at equilibrium.
    Miyazawa S
    J Theor Biol; 2016 Feb; 391():21-34. PubMed ID: 26678801
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Challenges in predicting stabilizing variations: An exploration.
    Benevenuta S; Birolo G; Sanavia T; Capriotti E; Fariselli P
    Front Mol Biosci; 2022; 9():1075570. PubMed ID: 36685278
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A natural upper bound to the accuracy of predicting protein stability changes upon mutations.
    Montanucci L; Martelli PL; Ben-Tal N; Fariselli P
    Bioinformatics; 2019 May; 35(9):1513-1517. PubMed ID: 30329016
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Documentation of an Imperative To Improve Methods for Predicting Membrane Protein Stability.
    Kroncke BM; Duran AM; Mendenhall JL; Meiler J; Blume JD; Sanders CR
    Biochemistry; 2016 Sep; 55(36):5002-9. PubMed ID: 27564391
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A base measure of precision for protein stability predictors: structural sensitivity.
    Caldararu O; Blundell TL; Kepp KP
    BMC Bioinformatics; 2021 Feb; 22(1):88. PubMed ID: 33632133
    [TBL] [Abstract][Full Text] [Related]  

  • 13. How protein stability and new functions trade off.
    Tokuriki N; Stricher F; Serrano L; Tawfik DS
    PLoS Comput Biol; 2008 Feb; 4(2):e1000002. PubMed ID: 18463696
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Structural analysis and prediction of protein mutant stability using distance and torsion potentials: role of secondary structure and solvent accessibility.
    Parthiban V; Gromiha MM; Hoppe C; Schomburg D
    Proteins; 2007 Jan; 66(1):41-52. PubMed ID: 17068801
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The stability effects of protein mutations appear to be universally distributed.
    Tokuriki N; Stricher F; Schymkowitz J; Serrano L; Tawfik DS
    J Mol Biol; 2007 Jun; 369(5):1318-32. PubMed ID: 17482644
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Average assignment method for predicting the stability of protein mutants.
    Saraboji K; Gromiha MM; Ponnuswamy MN
    Biopolymers; 2006 May; 82(1):80-92. PubMed ID: 16453276
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The linear interaction energy method for the prediction of protein stability changes upon mutation.
    Wickstrom L; Gallicchio E; Levy RM
    Proteins; 2012 Jan; 80(1):111-25. PubMed ID: 22038697
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Quantification of biases in predictions of protein stability changes upon mutations.
    Pucci F; Bernaerts KV; Kwasigroch JM; Rooman M
    Bioinformatics; 2018 Nov; 34(21):3659-3665. PubMed ID: 29718106
    [TBL] [Abstract][Full Text] [Related]  

  • 19. SCONES: Self-Consistent Neural Network for Protein Stability Prediction Upon Mutation.
    Samaga YBL; Raghunathan S; Priyakumar UD
    J Phys Chem B; 2021 Sep; 125(38):10657-10671. PubMed ID: 34546056
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Best templates outperform homology models in predicting the impact of mutations on protein stability.
    Pak MA; Ivankov DN
    Bioinformatics; 2022 Sep; 38(18):4312-4320. PubMed ID: 35894930
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.