236 related articles for article (PubMed ID: 35234904)
21. Rim 2/Hipa CACTA transposon display: a new genetic marker technique in Oryza species.
Kwon SJ; Park KC; Kim JH; Lee JK; Kim NS
BMC Genet; 2005 Mar; 6():15. PubMed ID: 15766385
[TBL] [Abstract][Full Text] [Related]
22. RGAAT: A Reference-based Genome Assembly and Annotation Tool for New Genomes and Upgrade of Known Genomes.
Liu W; Wu S; Lin Q; Gao S; Ding F; Zhang X; Aljohi HA; Yu J; Hu S
Genomics Proteomics Bioinformatics; 2018 Oct; 16(5):373-381. PubMed ID: 30583062
[TBL] [Abstract][Full Text] [Related]
23. Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome.
Tcherepanov V; Ehlers A; Upton C
BMC Genomics; 2006 Jun; 7():150. PubMed ID: 16772042
[TBL] [Abstract][Full Text] [Related]
24. Inversion and transposition of Tc1 transposon of C. elegans in mammalian cells.
Li ZH; Liu DP; Wang J; Guo ZC; Yin WX; Liang CC
Somat Cell Mol Genet; 1998 Nov; 24(6):363-9. PubMed ID: 10763415
[TBL] [Abstract][Full Text] [Related]
25. Transposome: a toolkit for annotation of transposable element families from unassembled sequence reads.
Staton SE; Burke JM
Bioinformatics; 2015 Jun; 31(11):1827-9. PubMed ID: 25644271
[TBL] [Abstract][Full Text] [Related]
26. RepeatFiller newly identifies megabases of aligning repetitive sequences and improves annotations of conserved non-exonic elements.
Osipova E; Hecker N; Hiller M
Gigascience; 2019 Nov; 8(11):. PubMed ID: 31742600
[TBL] [Abstract][Full Text] [Related]
27. GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations.
Manchanda N; Portwood JL; Woodhouse MR; Seetharam AS; Lawrence-Dill CJ; Andorf CM; Hufford MB
BMC Genomics; 2020 Mar; 21(1):193. PubMed ID: 32122303
[TBL] [Abstract][Full Text] [Related]
28. Manipulating the Caenorhabditis elegans genome using mariner transposons.
Robert VJ; Bessereau JL
Genetica; 2010 May; 138(5):541-9. PubMed ID: 19347589
[TBL] [Abstract][Full Text] [Related]
29. The mechanism of transposition of Tc3 in C. elegans.
van Luenen HG; Colloms SD; Plasterk RH
Cell; 1994 Oct; 79(2):293-301. PubMed ID: 7954797
[TBL] [Abstract][Full Text] [Related]
30. NemaFootPrinter: a web based software for the identification of conserved non-coding genome sequence regions between C. elegans and C. briggsae.
Rambaldi D; Guffanti A; Morandi P; Cassata G
BMC Bioinformatics; 2005 Dec; 6 Suppl 4(Suppl 4):S22. PubMed ID: 16351749
[TBL] [Abstract][Full Text] [Related]
31. TE-Tracker: systematic identification of transposition events through whole-genome resequencing.
Gilly A; Etcheverry M; Madoui MA; Guy J; Quadrana L; Alberti A; Martin A; Heitkam T; Engelen S; Labadie K; Le Pen J; Wincker P; Colot V; Aury JM
BMC Bioinformatics; 2014 Nov; 15(1):377. PubMed ID: 25408240
[TBL] [Abstract][Full Text] [Related]
32. TIR-Learner, a New Ensemble Method for TIR Transposable Element Annotation, Provides Evidence for Abundant New Transposable Elements in the Maize Genome.
Su W; Gu X; Peterson T
Mol Plant; 2019 Mar; 12(3):447-460. PubMed ID: 30802553
[TBL] [Abstract][Full Text] [Related]
33. The Rice Genome Knowledgebase (RGKbase): an annotation database for rice comparative genomics and evolutionary biology.
Wang D; Xia Y; Li X; Hou L; Yu J
Nucleic Acids Res; 2013 Jan; 41(Database issue):D1199-205. PubMed ID: 23193278
[TBL] [Abstract][Full Text] [Related]
34. FastAnnotator--an efficient transcript annotation web tool.
Chen TW; Gan RC; Wu TH; Huang PJ; Lee CY; Chen YY; Chen CC; Tang P
BMC Genomics; 2012; 13 Suppl 7(Suppl 7):S9. PubMed ID: 23281853
[TBL] [Abstract][Full Text] [Related]
35. TEnest 2.0: computational annotation and visualization of nested transposable elements.
Kronmiller BA; Wise RP
Methods Mol Biol; 2013; 1057():305-19. PubMed ID: 23918438
[TBL] [Abstract][Full Text] [Related]
36. HAMAP as SPARQL rules-A portable annotation pipeline for genomes and proteomes.
Bolleman J; de Castro E; Baratin D; Gehant S; Cuche BA; Auchincloss AH; Coudert E; Hulo C; Masson P; Pedruzzi I; Rivoire C; Xenarios I; Redaschi N; Bridge A
Gigascience; 2020 Feb; 9(2):. PubMed ID: 32034905
[TBL] [Abstract][Full Text] [Related]
37. Introduction of Plant Transposon Annotation for Beginners.
Gao D
Biology (Basel); 2023 Nov; 12(12):. PubMed ID: 38132293
[TBL] [Abstract][Full Text] [Related]
38. digIS: towards detecting distant and putative novel insertion sequence elements in prokaryotic genomes.
Puterová J; Martínek T
BMC Bioinformatics; 2021 May; 22(1):258. PubMed ID: 34016050
[TBL] [Abstract][Full Text] [Related]
39. Genomic sequence of a mutant strain of Caenorhabditis elegans with an altered recombination pattern.
Rose AM; O'Neil NJ; Bilenky M; Butterfield YS; Malhis N; Flibotte S; Jones MR; Marra M; Baillie DL; Jones SJ
BMC Genomics; 2010 Feb; 11():131. PubMed ID: 20178641
[TBL] [Abstract][Full Text] [Related]
40. Mobilization of quiet, endogenous Tc3 transposons of Caenorhabditis elegans by forced expression of Tc3 transposase.
van Luenen HG; Colloms SD; Plasterk RH
EMBO J; 1993 Jun; 12(6):2513-20. PubMed ID: 8389698
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
