These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
171 related articles for article (PubMed ID: 35271387)
1. Using single-cell models to predict the functionality of synthetic circuits at the population scale. Aditya C; Bertaux F; Batt G; Ruess J Proc Natl Acad Sci U S A; 2022 Mar; 119(11):e2114438119. PubMed ID: 35271387 [TBL] [Abstract][Full Text] [Related]
2. Rapid prototyping and design of cybergenetic single-cell controllers. Kumar S; Rullan M; Khammash M Nat Commun; 2021 Sep; 12(1):5651. PubMed ID: 34561433 [TBL] [Abstract][Full Text] [Related]
3. Stochastic Hazard Analysis of Genetic Circuits in iBioSim and STAMINA. Buecherl L; Roberts R; Fontanarrosa P; Thomas PJ; Mante J; Zhang Z; Myers CJ ACS Synth Biol; 2021 Oct; 10(10):2532-2540. PubMed ID: 34606710 [TBL] [Abstract][Full Text] [Related]
4. An Optogenetic Platform for Real-Time, Single-Cell Interrogation of Stochastic Transcriptional Regulation. Rullan M; Benzinger D; Schmidt GW; Milias-Argeitis A; Khammash M Mol Cell; 2018 May; 70(4):745-756.e6. PubMed ID: 29775585 [TBL] [Abstract][Full Text] [Related]
5. Using Models to (Re-)Design Synthetic Circuits. McCallum G; Potvin-Trottier L Methods Mol Biol; 2021; 2229():91-118. PubMed ID: 33405217 [TBL] [Abstract][Full Text] [Related]
6. Automated Design of Synthetic Gene Circuits in the Presence of Molecular Noise. Sequeiros C; Vázquez C; Banga JR; Otero-Muras I ACS Synth Biol; 2023 Oct; 12(10):2865-2876. PubMed ID: 37812682 [TBL] [Abstract][Full Text] [Related]
7. In silico feedback for in vivo regulation of a gene expression circuit. Milias-Argeitis A; Summers S; Stewart-Ornstein J; Zuleta I; Pincus D; El-Samad H; Khammash M; Lygeros J Nat Biotechnol; 2011 Nov; 29(12):1114-6. PubMed ID: 22057053 [TBL] [Abstract][Full Text] [Related]
8. Dynamic Multiplexed Control and Modeling of Optogenetic Systems Using the High-Throughput Optogenetic Platform, Lustro. Harmer ZP; Thompson JC; Cole DL; Venturelli OS; Zavala VM; McClean MN ACS Synth Biol; 2024 May; 13(5):1424-1433. PubMed ID: 38684225 [TBL] [Abstract][Full Text] [Related]
10. IDESS: a toolbox for identification and automated design of stochastic gene circuits. Sequeiros C; Pájaro M; Vázquez C; Banga JR; Otero-Muras I Bioinformatics; 2023 Nov; 39(11):. PubMed ID: 37988145 [TBL] [Abstract][Full Text] [Related]
11. Circuit-Host Coupling Induces Multifaceted Behavioral Modulations of a Gene Switch. Blanchard AE; Liao C; Lu T Biophys J; 2018 Feb; 114(3):737-746. PubMed ID: 29414718 [TBL] [Abstract][Full Text] [Related]
12. Engineering of regulated stochastic cell fate determination. Wu M; Su RQ; Li X; Ellis T; Lai YC; Wang X Proc Natl Acad Sci U S A; 2013 Jun; 110(26):10610-5. PubMed ID: 23754391 [TBL] [Abstract][Full Text] [Related]
14. Advanced methods for gene network identification and noise decomposition from single-cell data. Fang Z; Gupta A; Kumar S; Khammash M Nat Commun; 2024 Jun; 15(1):4911. PubMed ID: 38851792 [TBL] [Abstract][Full Text] [Related]
15. Stochastic Differential Equations for Practical Simulation of Gene Circuits. Picó J; Vignoni A; Boada Y Methods Mol Biol; 2021; 2229():41-90. PubMed ID: 33405216 [TBL] [Abstract][Full Text] [Related]
16. Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies. Bashor CJ; Patel N; Choubey S; Beyzavi A; Kondev J; Collins JJ; Khalil AS Science; 2019 May; 364(6440):593-597. PubMed ID: 31000590 [TBL] [Abstract][Full Text] [Related]
17. Stochastic simulations of a synthetic bacteria-yeast ecosystem. Biliouris K; Babson D; Schmidt-Dannert C; Kaznessis YN BMC Syst Biol; 2012 Jun; 6():58. PubMed ID: 22672814 [TBL] [Abstract][Full Text] [Related]
18. Host-aware modelling of a synthetic genetic oscillator. Darlington A; Bates DG Annu Int Conf IEEE Eng Med Biol Soc; 2016 Aug; 2016():1463-1466. PubMed ID: 28268602 [TBL] [Abstract][Full Text] [Related]
19. Design and connection of robust genetic circuits. Randall A; Guye P; Gupta S; Duportet X; Weiss R Methods Enzymol; 2011; 497():159-86. PubMed ID: 21601086 [TBL] [Abstract][Full Text] [Related]
20. A computational pipeline for identifying kinetic motifs to aid in the design and improvement of synthetic gene circuits. Chiang AW; Hwang MJ BMC Bioinformatics; 2013; 14 Suppl 16(Suppl 16):S5. PubMed ID: 24564638 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]