These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
187 related articles for article (PubMed ID: 35277707)
21. DIMM-SC: a Dirichlet mixture model for clustering droplet-based single cell transcriptomic data. Sun Z; Wang T; Deng K; Wang XF; Lafyatis R; Ding Y; Hu M; Chen W Bioinformatics; 2018 Jan; 34(1):139-146. PubMed ID: 29036318 [TBL] [Abstract][Full Text] [Related]
22. Single-Nucleus RNA-Seq Is Not Suitable for Detection of Microglial Activation Genes in Humans. Thrupp N; Sala Frigerio C; Wolfs L; Skene NG; Fattorelli N; Poovathingal S; Fourne Y; Matthews PM; Theys T; Mancuso R; de Strooper B; Fiers M Cell Rep; 2020 Sep; 32(13):108189. PubMed ID: 32997994 [TBL] [Abstract][Full Text] [Related]
23. Single-Cell RNA Sequencing Technology Landscape in 2023. Qu HQ; Kao C; Hakonarson H Stem Cells; 2024 Jan; 42(1):1-12. PubMed ID: 37934608 [TBL] [Abstract][Full Text] [Related]
24. Data Analysis in Single-Cell Transcriptome Sequencing. Gao S Methods Mol Biol; 2018; 1754():311-326. PubMed ID: 29536451 [TBL] [Abstract][Full Text] [Related]
25. Comparative analysis of common alignment tools for single-cell RNA sequencing. BrĂ¼ning RS; Tombor L; Schulz MH; Dimmeler S; John D Gigascience; 2022 Jan; 11():. PubMed ID: 35084033 [TBL] [Abstract][Full Text] [Related]
27. Effective methods for bulk RNA-seq deconvolution using scnRNA-seq transcriptomes. Cobos FA; Panah MJN; Epps J; Long X; Man TK; Chiu HS; Chomsky E; Kiner E; Krueger MJ; di Bernardo D; Voloch L; Molenaar J; van Hooff SR; Westermann F; Jansky S; Redell ML; Mestdagh P; Sumazin P Genome Biol; 2023 Aug; 24(1):177. PubMed ID: 37528411 [TBL] [Abstract][Full Text] [Related]
28. scHFC: a hybrid fuzzy clustering method for single-cell RNA-seq data optimized by natural computation. Wang J; Xia J; Tan D; Lin R; Su Y; Zheng CH Brief Bioinform; 2022 Mar; 23(2):. PubMed ID: 35136924 [TBL] [Abstract][Full Text] [Related]
29. Consequences and opportunities arising due to sparser single-cell RNA-seq datasets. Bouland GA; Mahfouz A; Reinders MJT Genome Biol; 2023 Apr; 24(1):86. PubMed ID: 37085823 [TBL] [Abstract][Full Text] [Related]
30. Random forest based similarity learning for single cell RNA sequencing data. Pouyan MB; Kostka D Bioinformatics; 2018 Jul; 34(13):i79-i88. PubMed ID: 29950006 [TBL] [Abstract][Full Text] [Related]
31. Analysis of Single-Cell Transcriptome Data in Drosophila. Yousefian S; Musillo MJ; Bageritz J Methods Mol Biol; 2022; 2540():93-111. PubMed ID: 35980574 [TBL] [Abstract][Full Text] [Related]
33. Scalable preprocessing for sparse scRNA-seq data exploiting prior knowledge. Mukherjee S; Zhang Y; Fan J; Seelig G; Kannan S Bioinformatics; 2018 Jul; 34(13):i124-i132. PubMed ID: 29949988 [TBL] [Abstract][Full Text] [Related]
34. Benchmarking mapping algorithms for cell-type annotating in mouse brain by integrating single-nucleus RNA-seq and Stereo-seq data. Tao Q; Xu Y; He Y; Luo T; Li X; Han L Brief Bioinform; 2024 May; 25(4):. PubMed ID: 38796691 [TBL] [Abstract][Full Text] [Related]
35. Error modelled gene expression analysis (EMOGEA) provides a superior overview of time course RNA-seq measurements and low count gene expression. Barra J; Taverna F; Bong F; Ahmed I; Karakach TK Brief Bioinform; 2024 Mar; 25(3):. PubMed ID: 38770716 [TBL] [Abstract][Full Text] [Related]
37. SAVER: gene expression recovery for single-cell RNA sequencing. Huang M; Wang J; Torre E; Dueck H; Shaffer S; Bonasio R; Murray JI; Raj A; Li M; Zhang NR Nat Methods; 2018 Jul; 15(7):539-542. PubMed ID: 29941873 [TBL] [Abstract][Full Text] [Related]
38. Detection of cell markers from single cell RNA-seq with sc2marker. Li R; Banjanin B; Schneider RK; Costa IG BMC Bioinformatics; 2022 Jul; 23(1):276. PubMed ID: 35831796 [TBL] [Abstract][Full Text] [Related]
39. Minnow: a principled framework for rapid simulation of dscRNA-seq data at the read level. Sarkar H; Srivastava A; Patro R Bioinformatics; 2019 Jul; 35(14):i136-i144. PubMed ID: 31510649 [TBL] [Abstract][Full Text] [Related]
40. PsiNorm: a scalable normalization for single-cell RNA-seq data. Borella M; Martello G; Risso D; Romualdi C Bioinformatics; 2021 Dec; 38(1):164-172. PubMed ID: 34499096 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]