471 related articles for article (PubMed ID: 35355264)
1. Unravelling the tumour genome: The evolutionary and clinical impacts of structural variants in tumourigenesis.
Hamdan A; Ewing A
J Pathol; 2022 Jul; 257(4):479-493. PubMed ID: 35355264
[TBL] [Abstract][Full Text] [Related]
2. Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies.
Zhao X; Collins RL; Lee WP; Weber AM; Jun Y; Zhu Q; Weisburd B; Huang Y; Audano PA; Wang H; Walker M; Lowther C; Fu J; ; Gerstein MB; Devine SE; Marschall T; Korbel JO; Eichler EE; Chaisson MJP; Lee C; Mills RE; Brand H; Talkowski ME
Am J Hum Genet; 2021 May; 108(5):919-928. PubMed ID: 33789087
[TBL] [Abstract][Full Text] [Related]
3. Comprehensive evaluation of structural variation detection algorithms for whole genome sequencing.
Kosugi S; Momozawa Y; Liu X; Terao C; Kubo M; Kamatani Y
Genome Biol; 2019 Jun; 20(1):117. PubMed ID: 31159850
[TBL] [Abstract][Full Text] [Related]
4. Genome sequencing in cytogenetics: Comparison of short-read and linked-read approaches for germline structural variant detection and characterization.
Uguen K; Jubin C; Duffourd Y; Bardel C; Malan V; Dupont JM; El Khattabi L; Chatron N; Vitobello A; Rollat-Farnier PA; Baulard C; Lelorch M; Leduc A; Tisserant E; Tran Mau-Them F; Danjean V; Delepine M; Till M; Meyer V; Lyonnet S; Mosca-Boidron AL; Thevenon J; Faivre L; Thauvin-Robinet C; Schluth-Bolard C; Boland A; Olaso R; Callier P; Romana S; Deleuze JF; Sanlaville D
Mol Genet Genomic Med; 2020 Mar; 8(3):e1114. PubMed ID: 31985172
[TBL] [Abstract][Full Text] [Related]
5. Optical genome mapping and revisiting short-read genome sequencing data reveal previously overlooked structural variants disrupting retinal disease-associated genes.
de Bruijn SE; Rodenburg K; Corominas J; Ben-Yosef T; Reurink J; Kremer H; Whelan L; Plomp AS; Berger W; Farrar GJ; Ferenc Kovács Á; Fajardy I; Hitti-Malin RJ; Weisschuh N; Weener ME; Sharon D; Pennings RJE; Haer-Wigman L; Hoyng CB; Nelen MR; Vissers LELM; van den Born LI; Gilissen C; Cremers FPM; Hoischen A; Neveling K; Roosing S
Genet Med; 2023 Mar; 25(3):100345. PubMed ID: 36524988
[TBL] [Abstract][Full Text] [Related]
6. Leveraging single-cell sequencing to unravel intratumour heterogeneity and tumour evolution in human cancers.
Bowes AL; Tarabichi M; Pillay N; Van Loo P
J Pathol; 2022 Jul; 257(4):466-478. PubMed ID: 35438189
[TBL] [Abstract][Full Text] [Related]
7. From cytogenetics to cytogenomics: whole-genome sequencing as a first-line test comprehensively captures the diverse spectrum of disease-causing genetic variation underlying intellectual disability.
Lindstrand A; Eisfeldt J; Pettersson M; Carvalho CMB; Kvarnung M; Grigelioniene G; Anderlid BM; Bjerin O; Gustavsson P; Hammarsjö A; Georgii-Hemming P; Iwarsson E; Johansson-Soller M; Lagerstedt-Robinson K; Lieden A; Magnusson M; Martin M; Malmgren H; Nordenskjöld M; Norling A; Sahlin E; Stranneheim H; Tham E; Wincent J; Ygberg S; Wedell A; Wirta V; Nordgren A; Lundin J; Nilsson D
Genome Med; 2019 Nov; 11(1):68. PubMed ID: 31694722
[TBL] [Abstract][Full Text] [Related]
8. Toward the functional interpretation of somatic structural variations: bulk- and single-cell approaches.
Yi D; Nam JW; Jeong H
Brief Bioinform; 2023 Sep; 24(5):. PubMed ID: 37587831
[TBL] [Abstract][Full Text] [Related]
9. StrVCTVRE: A supervised learning method to predict the pathogenicity of human genome structural variants.
Sharo AG; Hu Z; Sunyaev SR; Brenner SE
Am J Hum Genet; 2022 Feb; 109(2):195-209. PubMed ID: 35032432
[TBL] [Abstract][Full Text] [Related]
10. Identification of genomic indels and structural variations using split reads.
Zhang ZD; Du J; Lam H; Abyzov A; Urban AE; Snyder M; Gerstein M
BMC Genomics; 2011 Jul; 12():375. PubMed ID: 21787423
[TBL] [Abstract][Full Text] [Related]
11. Detecting a long insertion variant in SAMD12 by SMRT sequencing: implications of long-read whole-genome sequencing for repeat expansion diseases.
Mizuguchi T; Toyota T; Adachi H; Miyake N; Matsumoto N; Miyatake S
J Hum Genet; 2019 Mar; 64(3):191-197. PubMed ID: 30559482
[TBL] [Abstract][Full Text] [Related]
12. Comprehensive analysis of structural variants in chickens using PacBio sequencing.
Zhang J; Nie C; Li X; Zhao X; Jia Y; Han J; Chen Y; Wang L; Lv X; Yang W; Li K; Zhang J; Ning Z; Bao H; Zhao C; Li J; Qu L
Front Genet; 2022; 13():971588. PubMed ID: 36338955
[TBL] [Abstract][Full Text] [Related]
13. NPSV: A simulation-driven approach to genotyping structural variants in whole-genome sequencing data.
Linderman MD; Paudyal C; Shakeel M; Kelley W; Bashir A; Gelb BD
Gigascience; 2021 Jul; 10(7):. PubMed ID: 34195837
[TBL] [Abstract][Full Text] [Related]
14. Multi-platform discovery of haplotype-resolved structural variation in human genomes.
Chaisson MJP; Sanders AD; Zhao X; Malhotra A; Porubsky D; Rausch T; Gardner EJ; Rodriguez OL; Guo L; Collins RL; Fan X; Wen J; Handsaker RE; Fairley S; Kronenberg ZN; Kong X; Hormozdiari F; Lee D; Wenger AM; Hastie AR; Antaki D; Anantharaman T; Audano PA; Brand H; Cantsilieris S; Cao H; Cerveira E; Chen C; Chen X; Chin CS; Chong Z; Chuang NT; Lambert CC; Church DM; Clarke L; Farrell A; Flores J; Galeev T; Gorkin DU; Gujral M; Guryev V; Heaton WH; Korlach J; Kumar S; Kwon JY; Lam ET; Lee JE; Lee J; Lee WP; Lee SP; Li S; Marks P; Viaud-Martinez K; Meiers S; Munson KM; Navarro FCP; Nelson BJ; Nodzak C; Noor A; Kyriazopoulou-Panagiotopoulou S; Pang AWC; Qiu Y; Rosanio G; Ryan M; Stütz A; Spierings DCJ; Ward A; Welch AE; Xiao M; Xu W; Zhang C; Zhu Q; Zheng-Bradley X; Lowy E; Yakneen S; McCarroll S; Jun G; Ding L; Koh CL; Ren B; Flicek P; Chen K; Gerstein MB; Kwok PY; Lansdorp PM; Marth GT; Sebat J; Shi X; Bashir A; Ye K; Devine SE; Talkowski ME; Mills RE; Marschall T; Korbel JO; Eichler EE; Lee C
Nat Commun; 2019 Apr; 10(1):1784. PubMed ID: 30992455
[TBL] [Abstract][Full Text] [Related]
15. Integrated paired-end enhancer profiling and whole-genome sequencing reveals recurrent
Ooi WF; Nargund AM; Lim KJ; Zhang S; Xing M; Mandoli A; Lim JQ; Ho SWT; Guo Y; Yao X; Lin SJ; Nandi T; Xu C; Ong X; Lee M; Tan AL; Lam YN; Teo JX; Kaneda A; White KP; Lim WK; Rozen SG; Teh BT; Li S; Skanderup AJ; Tan P
Gut; 2020 Jun; 69(6):1039-1052. PubMed ID: 31542774
[TBL] [Abstract][Full Text] [Related]
16. Revealing the impact of structural variants in multiple myeloma.
Rustad EH; Yellapantula VD; Glodzik D; Maclachlan KH; Diamond B; Boyle EM; Ashby C; Blaney P; Gundem G; Hultcrantz M; Leongamornlert D; Angelopoulos N; Agnelli L; Auclair D; Zhang Y; Dogan A; Bolli N; Papaemmanuil E; Anderson KC; Moreau P; Avet-Loiseau H; Munshi NC; Keats JJ; Campbell PJ; Morgan GJ; Landgren O; Maura F
Blood Cancer Discov; 2020 Nov; 1(3):258-273. PubMed ID: 33392515
[TBL] [Abstract][Full Text] [Related]
17. Comparison of multiple algorithms to reliably detect structural variants in pears.
Liu Y; Zhang M; Sun J; Chang W; Sun M; Zhang S; Wu J
BMC Genomics; 2020 Jan; 21(1):61. PubMed ID: 31959124
[TBL] [Abstract][Full Text] [Related]
18. Long-Read Whole-Genome Sequencing Using a Nanopore Sequencer and Detection of Structural Variants in Cancer Genomes.
Haga Y; Sakamoto Y; Arai M; Suzuki Y; Suzuki A
Methods Mol Biol; 2023; 2632():177-189. PubMed ID: 36781729
[TBL] [Abstract][Full Text] [Related]
19. SVLR: Genome Structural Variant Detection Using Long-Read Sequencing Data.
Gu W; Zhou A; Wang L; Sun S; Cui X; Zhu D
J Comput Biol; 2021 Aug; 28(8):774-788. PubMed ID: 33973820
[TBL] [Abstract][Full Text] [Related]
20. PGG.SV: a whole-genome-sequencing-based structural variant resource and data analysis platform.
Wang Y; Ling Y; Gong J; Zhao X; Zhou H; Xie B; Lou H; Zhuang X; Jin L; ; Fan S; Zhang G; Xu S
Nucleic Acids Res; 2023 Jan; 51(D1):D1109-D1116. PubMed ID: 36243989
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
