153 related articles for article (PubMed ID: 35360404)
21. SBML Level 3 package: Multistate, Multicomponent and Multicompartment Species, Version 1, Release 1.
Zhang F; Meier-Schellersheim M
J Integr Bioinform; 2018 Apr; 15(1):. PubMed ID: 29676994
[TBL] [Abstract][Full Text] [Related]
22. sbml-diff: A Tool for Visually Comparing SBML Models in Synthetic Biology.
Scott-Brown J; Papachristodoulou A
ACS Synth Biol; 2017 Jul; 6(7):1225-1229. PubMed ID: 28035814
[TBL] [Abstract][Full Text] [Related]
23. The SBML ODE Solver Library: a native API for symbolic and fast numerical analysis of reaction networks.
Machné R; Finney A; Müller S; Lu J; Widder S; Flamm C
Bioinformatics; 2006 Jun; 22(11):1406-7. PubMed ID: 16527832
[TBL] [Abstract][Full Text] [Related]
24. Scaling up genetic circuit design for cellular computing: advances and prospects.
Xiang Y; Dalchau N; Wang B
Nat Comput; 2018; 17(4):833-853. PubMed ID: 30524216
[TBL] [Abstract][Full Text] [Related]
25. CSML2SBML: a novel tool for converting quantitative biological pathway models from CSML into SBML.
Li C; Nagasaki M; Ikeda E; Sekiya Y; Miyano S
Biosystems; 2014 Jul; 121():22-8. PubMed ID: 24881961
[TBL] [Abstract][Full Text] [Related]
26. SBML Level 3 package: Groups, Version 1 Release 1.
Hucka M; Smith LP
J Integr Bioinform; 2016 Dec; 13(3):290. PubMed ID: 28187406
[TBL] [Abstract][Full Text] [Related]
27. Genome-Scale
Ando D; García Martín H
Methods Mol Biol; 2019; 1859():317-345. PubMed ID: 30421239
[TBL] [Abstract][Full Text] [Related]
28. The Systems Biology Markup Language (SBML) Level 3 Package: Qualitative Models, Version 1, Release 1.
Chaouiya C; Keating SM; Berenguier D; Naldi A; Thieffry D; van Iersel MP; Le Novère N; Helikar T
J Integr Bioinform; 2015 Sep; 12(2):270. PubMed ID: 26528568
[TBL] [Abstract][Full Text] [Related]
29. A model diagram layout extension for SBML.
Gauges R; Rost U; Sahle S; Wegner K
Bioinformatics; 2006 Aug; 22(15):1879-85. PubMed ID: 16709586
[TBL] [Abstract][Full Text] [Related]
30. Systems biology markup language (SBML) level 3 package: multistate, multicomponent and multicompartment species, version 1, release 2.
Zhang F; Smith LP; Blinov ML; Faeder J; Hlavacek WS; Juan Tapia J; Keating SM; Rodriguez N; Dräger A; Harris LA; Finney A; Hu B; Hucka M; Meier-Schellersheim M
J Integr Bioinform; 2020 Jul; 17(2-3):. PubMed ID: 32628633
[TBL] [Abstract][Full Text] [Related]
31. Hybrid Boolean gates show that Cas12c controls transcription activation effectively in the yeast
Liu Y; Ge H; Marchisio MA
Front Bioeng Biotechnol; 2023; 11():1267174. PubMed ID: 37771576
[TBL] [Abstract][Full Text] [Related]
32. Qualitative translation of relations from BioPAX to SBML qual.
Büchel F; Wrzodek C; Mittag F; Dräger A; Eichner J; Rodriguez N; Le Novère N; Zell A
Bioinformatics; 2012 Oct; 28(20):2648-53. PubMed ID: 22923304
[TBL] [Abstract][Full Text] [Related]
33. The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core.
Hucka M; Bergmann FT; Dräger A; Hoops S; Keating SM; Le Novère N; Myers CJ; Olivier BG; Sahle S; Schaff JC; Smith LP; Waltemath D; Wilkinson DJ
J Integr Bioinform; 2018 Mar; 15(1):. PubMed ID: 29522418
[TBL] [Abstract][Full Text] [Related]
34. Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1.
Smith LP; Moodie SL; Bergmann FT; Gillespie C; Keating SM; König M; Myers CJ; Swat MJ; Wilkinson DJ; Hucka M
J Integr Bioinform; 2020 Jul; 17(2-3):. PubMed ID: 32750035
[TBL] [Abstract][Full Text] [Related]
35. Genetic circuit design automation for yeast.
Chen Y; Zhang S; Young EM; Jones TS; Densmore D; Voigt CA
Nat Microbiol; 2020 Nov; 5(11):1349-1360. PubMed ID: 32747797
[TBL] [Abstract][Full Text] [Related]
36. Cell-to-Cell Communication Circuits: Quantitative Analysis of Synthetic Logic Gates.
Hoffman-Sommer M; Supady A; Klipp E
Front Physiol; 2012; 3():287. PubMed ID: 22934039
[TBL] [Abstract][Full Text] [Related]
37. SBML Level 3 Package: Flux Balance Constraints version 2.
Olivier BG; Bergmann FT
J Integr Bioinform; 2018 Mar; 15(1):. PubMed ID: 29522419
[TBL] [Abstract][Full Text] [Related]
38. Bio-Algorithmic Workflows for Standardized Synthetic Biology Constructs.
Goñi-Moreno A; de Lorenzo V
Methods Mol Biol; 2018; 1772():363-372. PubMed ID: 29754239
[TBL] [Abstract][Full Text] [Related]
39. Efficient Analysis of Systems Biology Markup Language Models of Cellular Populations Using Arrays.
Watanabe L; Myers CJ
ACS Synth Biol; 2016 Aug; 5(8):835-41. PubMed ID: 26912276
[TBL] [Abstract][Full Text] [Related]
40. An autonomous in vivo dual selection protocol for boolean genetic circuits.
Beneš D; Sosík P; Rodríguez-Patón A
Artif Life; 2015; 21(2):247-60. PubMed ID: 25622012
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]