195 related articles for article (PubMed ID: 35372810)
1. High-resolution Slide-seqV2 spatial transcriptomics enables discovery of disease-specific cell neighborhoods and pathways.
Marshall JL; Noel T; Wang QS; Chen H; Murray E; Subramanian A; Vernon KA; Bazua-Valenti S; Liguori K; Keller K; Stickels RR; McBean B; Heneghan RM; Weins A; Macosko EZ; Chen F; Greka A
iScience; 2022 Apr; 25(4):104097. PubMed ID: 35372810
[TBL] [Abstract][Full Text] [Related]
2. Highly sensitive spatial transcriptomics at near-cellular resolution with Slide-seqV2.
Stickels RR; Murray E; Kumar P; Li J; Marshall JL; Di Bella DJ; Arlotta P; Macosko EZ; Chen F
Nat Biotechnol; 2021 Mar; 39(3):313-319. PubMed ID: 33288904
[TBL] [Abstract][Full Text] [Related]
3. Principles of Spatial Transcriptomics Analysis: A Practical Walk-Through in Kidney Tissue.
Noel T; Wang QS; Greka A; Marshall JL
Front Physiol; 2021; 12():809346. PubMed ID: 35069263
[TBL] [Abstract][Full Text] [Related]
4. Identification and Localization of Cell Types in the Mouse Olfactory Bulb Using Slide-SeqV2.
Fang A; Petentler K; Price A; Malloy S; Peterson M; Maddera L; Russell J; Treese M; Li H; Wang Y; McKinney S; Perera A; Yu CR
Methods Mol Biol; 2023; 2710():171-183. PubMed ID: 37688732
[TBL] [Abstract][Full Text] [Related]
5. Uncover spatially informed variations for single-cell spatial transcriptomics with STew.
Guo N; Vargas J; Reynoso S; Fritz D; Krishna R; Wang C; Zhang F
Bioinform Adv; 2024; 4(1):vbae064. PubMed ID: 38827413
[TBL] [Abstract][Full Text] [Related]
6. Slide-tags: scalable, single-nucleus barcoding for multi-modal spatial genomics.
Russell AJC; Weir JA; Nadaf NM; Shabet M; Kumar V; Kambhampati S; Raichur R; Marrero GJ; Liu S; Balderrama KS; Vanderburg CR; Shanmugam V; Tian L; Wu CJ; Yoon CH; Macosko EZ; Chen F
bioRxiv; 2023 Apr; ():. PubMed ID: 37066158
[TBL] [Abstract][Full Text] [Related]
7. Correction to: Identification and Localization of Cell Types in the Mouse Olfactory Bulb Using Slide-SeqV2.
Fang A; Petentler K; Price A; Malloy S; Peterson M; Maddera L; Russell J; Treese M; Li H; Wang Y; McKinney S; Perera A; Yu CR
Methods Mol Biol; 2023; 2710():C1. PubMed ID: 37819611
[No Abstract] [Full Text] [Related]
8. SIMVI reveals intrinsic and spatial-induced states in spatial omics data.
Dong M; Kluger H; Fan R; Kluger Y
bioRxiv; 2023 Aug; ():. PubMed ID: 37693629
[TBL] [Abstract][Full Text] [Related]
9. Dissecting mammalian spermatogenesis using spatial transcriptomics.
Chen H; Murray E; Sinha A; Laumas A; Li J; Lesman D; Nie X; Hotaling J; Guo J; Cairns BR; Macosko EZ; Cheng CY; Chen F
Cell Rep; 2021 Nov; 37(5):109915. PubMed ID: 34731600
[TBL] [Abstract][Full Text] [Related]
10. A comprehensive mouse kidney atlas enables rare cell population characterization and robust marker discovery.
Novella-Rausell C; Grudniewska M; Peters DJM; Mahfouz A
iScience; 2023 Jun; 26(6):106877. PubMed ID: 37275529
[TBL] [Abstract][Full Text] [Related]
11. Single-cell genomics and spatial transcriptomics: Discovery of novel cell states and cellular interactions in liver physiology and disease biology.
Saviano A; Henderson NC; Baumert TF
J Hepatol; 2020 Nov; 73(5):1219-1230. PubMed ID: 32534107
[TBL] [Abstract][Full Text] [Related]
12. Barcoded solid-phase RNA capture for Spatial Transcriptomics profiling in mammalian tissue sections.
Salmén F; Ståhl PL; Mollbrink A; Navarro JF; Vickovic S; Frisén J; Lundeberg J
Nat Protoc; 2018 Nov; 13(11):2501-2534. PubMed ID: 30353172
[TBL] [Abstract][Full Text] [Related]
13. Characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomic data with nonuniform cellular densities.
Miller BF; Bambah-Mukku D; Dulac C; Zhuang X; Fan J
Genome Res; 2021 Oct; 31(10):1843-1855. PubMed ID: 34035045
[TBL] [Abstract][Full Text] [Related]
14. Slide-seq: A scalable technology for measuring genome-wide expression at high spatial resolution.
Rodriques SG; Stickels RR; Goeva A; Martin CA; Murray E; Vanderburg CR; Welch J; Chen LM; Chen F; Macosko EZ
Science; 2019 Mar; 363(6434):1463-1467. PubMed ID: 30923225
[TBL] [Abstract][Full Text] [Related]
15. Does mouse embryo primordial germ cell activation start before implantation as suggested by single-cell transcriptomics dynamics?
Gerovska D; Araúzo-Bravo MJ
Mol Hum Reprod; 2016 Mar; 22(3):208-25. PubMed ID: 26740066
[TBL] [Abstract][Full Text] [Related]
16. Single-cell transcriptome analysis of the Akimba mouse retina reveals cell-type-specific insights into the pathobiology of diabetic retinopathy.
Van Hove I; De Groef L; Boeckx B; Modave E; Hu TT; Beets K; Etienne I; Van Bergen T; Lambrechts D; Moons L; Feyen JHM; Porcu M
Diabetologia; 2020 Oct; 63(10):2235-2248. PubMed ID: 32734440
[TBL] [Abstract][Full Text] [Related]
17. Fusion transcript detection using spatial transcriptomics.
Friedrich S; Sonnhammer ELL
BMC Med Genomics; 2020 Aug; 13(1):110. PubMed ID: 32753032
[TBL] [Abstract][Full Text] [Related]
18. Visualization and analysis of gene expression in tissue sections by spatial transcriptomics.
Ståhl PL; Salmén F; Vickovic S; Lundmark A; Navarro JF; Magnusson J; Giacomello S; Asp M; Westholm JO; Huss M; Mollbrink A; Linnarsson S; Codeluppi S; Borg Å; Pontén F; Costea PI; Sahlén P; Mulder J; Bergmann O; Lundeberg J; Frisén J
Science; 2016 Jul; 353(6294):78-82. PubMed ID: 27365449
[TBL] [Abstract][Full Text] [Related]
19. Subcellular Transcriptomics and Proteomics: A Comparative Methods Review.
Christopher JA; Geladaki A; Dawson CS; Vennard OL; Lilley KS
Mol Cell Proteomics; 2022 Feb; 21(2):100186. PubMed ID: 34922010
[TBL] [Abstract][Full Text] [Related]
20. High-Resolution Characterization of Human Brain Cortex with High-Fidelity Spatial Transcriptomic Slides (HiFi-Slides).
Xu T; Zhu E; Zhang C; Calandrelli R; Lin P; Zhong S
bioRxiv; 2023 Jun; ():. PubMed ID: 37398363
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
