232 related articles for article (PubMed ID: 35394192)
1. A stochastic Farris transform for genetic data under the multispecies coalescent with applications to data requirements.
Dasarathy G; Mossel E; Nowak R; Roch S
J Math Biol; 2022 Apr; 84(5):36. PubMed ID: 35394192
[TBL] [Abstract][Full Text] [Related]
2. Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent.
Allman ES; Degnan JH; Rhodes JA
J Math Biol; 2011 Jun; 62(6):833-62. PubMed ID: 20652704
[TBL] [Abstract][Full Text] [Related]
3. Identifiability and Reconstructibility of Species Phylogenies Under a Modified Coalescent.
Long C; Kubatko L
Bull Math Biol; 2019 Feb; 81(2):408-430. PubMed ID: 29926380
[TBL] [Abstract][Full Text] [Related]
4. Anomalous unrooted gene trees.
Degnan JH
Syst Biol; 2013 Jul; 62(4):574-90. PubMed ID: 23576318
[TBL] [Abstract][Full Text] [Related]
5. Theoretical and Practical Considerations when using Retroelement Insertions to Estimate Species Trees in the Anomaly Zone.
Molloy EK; Gatesy J; Springer MS
Syst Biol; 2022 Apr; 71(3):721-740. PubMed ID: 34677617
[TBL] [Abstract][Full Text] [Related]
6. Split Probabilities and Species Tree Inference Under the Multispecies Coalescent Model.
Allman ES; Degnan JH; Rhodes JA
Bull Math Biol; 2018 Jan; 80(1):64-103. PubMed ID: 29127546
[TBL] [Abstract][Full Text] [Related]
7. Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models.
Chauve C; Ponty Y; Wallner M
J Math Biol; 2020 Apr; 80(5):1353-1388. PubMed ID: 32060618
[TBL] [Abstract][Full Text] [Related]
8. Statistical inconsistency of the unrooted minimize deep coalescence criterion.
Alanzi AAR; Degnan JH
PLoS One; 2021; 16(5):e0251107. PubMed ID: 33970931
[TBL] [Abstract][Full Text] [Related]
9. Applying species-tree analyses to deep phylogenetic histories: challenges and potential suggested from a survey of empirical phylogenetic studies.
Lanier HC; Knowles LL
Mol Phylogenet Evol; 2015 Feb; 83():191-9. PubMed ID: 25450097
[TBL] [Abstract][Full Text] [Related]
10. Inferring rooted species trees from unrooted gene trees using approximate Bayesian computation.
Alanzi ARA; Degnan JH
Mol Phylogenet Evol; 2017 Nov; 116():13-24. PubMed ID: 28780022
[TBL] [Abstract][Full Text] [Related]
11. Sources of error inherent in species-tree estimation: impact of mutational and coalescent effects on accuracy and implications for choosing among different methods.
Huang H; He Q; Kubatko LS; Knowles LL
Syst Biol; 2010 Oct; 59(5):573-83. PubMed ID: 20833951
[TBL] [Abstract][Full Text] [Related]
12. Estimating species phylogeny from gene-tree probabilities despite incomplete lineage sorting: an example from Melanoplus grasshoppers.
Carstens BC; Knowles LL
Syst Biol; 2007 Jun; 56(3):400-11. PubMed ID: 17520504
[TBL] [Abstract][Full Text] [Related]
13. Bayesian-Weighted Triplet and Quartet Methods for Species Tree Inference.
Richards A; Kubatko L
Bull Math Biol; 2021 Jul; 83(9):93. PubMed ID: 34297209
[TBL] [Abstract][Full Text] [Related]
14. Computing the probability of gene trees concordant with the species tree in the multispecies coalescent.
Truszkowski J; Scornavacca C; Pardi F
Theor Popul Biol; 2021 Feb; 137():22-31. PubMed ID: 33333117
[TBL] [Abstract][Full Text] [Related]
15. The gene tree delusion.
Springer MS; Gatesy J
Mol Phylogenet Evol; 2016 Jan; 94(Pt A):1-33. PubMed ID: 26238460
[TBL] [Abstract][Full Text] [Related]
16. Enumeration of Ancestral Configurations for Matching Gene Trees and Species Trees.
Disanto F; Rosenberg NA
J Comput Biol; 2017 Sep; 24(9):831-850. PubMed ID: 28437136
[TBL] [Abstract][Full Text] [Related]
17. To Include or Not to Include: The Impact of Gene Filtering on Species Tree Estimation Methods.
Molloy EK; Warnow T
Syst Biol; 2018 Mar; 67(2):285-303. PubMed ID: 29029338
[TBL] [Abstract][Full Text] [Related]
18. Accuracy of estimated phylogenetic trees from molecular data. II. Gene frequency data.
Nei M; Tajima F; Tateno Y
J Mol Evol; 1983; 19(2):153-70. PubMed ID: 6571220
[TBL] [Abstract][Full Text] [Related]
19. Challenges in Species Tree Estimation Under the Multispecies Coalescent Model.
Xu B; Yang Z
Genetics; 2016 Dec; 204(4):1353-1368. PubMed ID: 27927902
[TBL] [Abstract][Full Text] [Related]
20. A comparative study of SVDquartets and other coalescent-based species tree estimation methods.
Chou J; Gupta A; Yaduvanshi S; Davidson R; Nute M; Mirarab S; Warnow T
BMC Genomics; 2015; 16 Suppl 10(Suppl 10):S2. PubMed ID: 26449249
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
