234 related articles for article (PubMed ID: 35401463)
1. Application of MinION Amplicon Sequencing to Buccal Swab Samples for Improving Resolution and Throughput of Rumen Microbiota Analysis.
Miura H; Takeda M; Yamaguchi M; Ohtani Y; Endo G; Masuda Y; Ito K; Nagura Y; Iwashita K; Mitani T; Suzuki Y; Kobayashi Y; Koike S
Front Microbiol; 2022; 13():783058. PubMed ID: 35401463
[TBL] [Abstract][Full Text] [Related]
2. Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers.
Myer PR; Kim M; Freetly HC; Smith TPL
J Microbiol Methods; 2016 Aug; 127():132-140. PubMed ID: 27282101
[TBL] [Abstract][Full Text] [Related]
3. Full-length 16S rRNA gene sequencing by PacBio improves taxonomic resolution in human microbiome samples.
Buetas E; Jordán-López M; López-Roldán A; D'Auria G; Martínez-Priego L; De Marco G; Carda-Diéguez M; Mira A
BMC Genomics; 2024 Mar; 25(1):310. PubMed ID: 38528457
[TBL] [Abstract][Full Text] [Related]
4. Comparison of Oxford Nanopore Technologies and Illumina MiSeq sequencing with mock communities and agricultural soil.
Stevens BM; Creed TB; Reardon CL; Manter DK
Sci Rep; 2023 Jun; 13(1):9323. PubMed ID: 37291169
[TBL] [Abstract][Full Text] [Related]
5. Evaluating Established Methods for Rumen 16S rRNA Amplicon Sequencing With Mock Microbial Populations.
McGovern E; Waters SM; Blackshields G; McCabe MS
Front Microbiol; 2018; 9():1365. PubMed ID: 29988486
[TBL] [Abstract][Full Text] [Related]
6. Evolution of rumen and oral microbiota in calves is influenced by age and time of weaning.
Amin N; Schwarzkopf S; Kinoshita A; Tröscher-Mußotter J; Dänicke S; Camarinha-Silva A; Huber K; Frahm J; Seifert J
Anim Microbiome; 2021 Apr; 3(1):31. PubMed ID: 33883031
[TBL] [Abstract][Full Text] [Related]
7. Characterization of Fecal Microbiota with Clinical Specimen Using Long-Read and Short-Read Sequencing Platform.
Wei PL; Hung CS; Kao YW; Lin YC; Lee CY; Chang TH; Shia BC; Lin JC
Int J Mol Sci; 2020 Sep; 21(19):. PubMed ID: 32993155
[TBL] [Abstract][Full Text] [Related]
8. Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification.
Wagner J; Coupland P; Browne HP; Lawley TD; Francis SC; Parkhill J
BMC Microbiol; 2016 Nov; 16(1):274. PubMed ID: 27842515
[TBL] [Abstract][Full Text] [Related]
9. Validating the Use of Bovine Buccal Sampling as a Proxy for the Rumen Microbiota by Using a Time Course and Random Forest Classification Approach.
Young J; Skarlupka JH; Cox MS; Resende RT; Fischer A; Kalscheur KF; McClure JC; Cole JB; Suen G; Bickhart DM
Appl Environ Microbiol; 2020 Aug; 86(17):. PubMed ID: 32591382
[TBL] [Abstract][Full Text] [Related]
10. A preliminary study on the potential of Nanopore MinION and Illumina MiSeq 16S rRNA gene sequencing to characterize building-dust microbiomes.
Nygaard AB; Tunsjø HS; Meisal R; Charnock C
Sci Rep; 2020 Feb; 10(1):3209. PubMed ID: 32081924
[TBL] [Abstract][Full Text] [Related]
11. MinION Sequencing of colorectal cancer tumour microbiomes-A comparison with amplicon-based and RNA-Sequencing.
Taylor WS; Pearson J; Miller A; Schmeier S; Frizelle FA; Purcell RV
PLoS One; 2020; 15(5):e0233170. PubMed ID: 32433701
[TBL] [Abstract][Full Text] [Related]
12. Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome.
Salamon D; Zapała B; Krawczyk A; Potasiewicz A; Nikiforuk A; Stój A; Gosiewski T
Appl Microbiol Biotechnol; 2022 Nov; 106(22):7671-7681. PubMed ID: 36322250
[TBL] [Abstract][Full Text] [Related]
13. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
[TBL] [Abstract][Full Text] [Related]
14. High-quality single amplicon sequencing method for illumina MiSeq platform using pool of 'N' (0-10) spacer-linked target specific primers without PhiX spike-in.
Naik T; Sharda M; C P L; Virbhadra K; Pandit A
BMC Genomics; 2023 Mar; 24(1):141. PubMed ID: 36959538
[TBL] [Abstract][Full Text] [Related]
15. Metagenomic and near full-length 16S rRNA sequence data in support of the phylogenetic analysis of the rumen bacterial community in steers.
Myer PR; Kim M; Freetly HC; Smith TP
Data Brief; 2016 Sep; 8():1048-53. PubMed ID: 27508263
[TBL] [Abstract][Full Text] [Related]
16. The impact of rumen cannulation on the microbial community of goat rumens as measured using 16S rRNA high-throughput sequencing.
Wang L; Wu D; Yan T; Wang L
J Anim Physiol Anim Nutr (Berl); 2018 Feb; 102(1):175-183. PubMed ID: 29057500
[TBL] [Abstract][Full Text] [Related]
17. A method for high precision sequencing of near full-length 16S rRNA genes on an Illumina MiSeq.
Burke CM; Darling AE
PeerJ; 2016; 4():e2492. PubMed ID: 27688981
[TBL] [Abstract][Full Text] [Related]
18. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
[TBL] [Abstract][Full Text] [Related]
19. Taxonomic Assessment of Rumen Microbiota Using Total RNA and Targeted Amplicon Sequencing Approaches.
Li F; Henderson G; Sun X; Cox F; Janssen PH; Guan le L
Front Microbiol; 2016; 7():987. PubMed ID: 27446027
[TBL] [Abstract][Full Text] [Related]
20. Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum.
Hahn A; Sanyal A; Perez GF; Colberg-Poley AM; Campos J; Rose MC; Pérez-Losada M
J Microbiol Methods; 2016 Nov; 130():95-99. PubMed ID: 27609714
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
