These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
162 related articles for article (PubMed ID: 35481095)
21. Molecular Dynamics and Free Energy Study of the Conformational Equilibria in the UUUU RNA Hairpin. Deng NJ; Cieplak P J Chem Theory Comput; 2007 Jul; 3(4):1435-50. PubMed ID: 26633215 [TBL] [Abstract][Full Text] [Related]
22. Molecular dynamics simulations of the denaturation and refolding of an RNA tetraloop. Li W; Ma B; Shapiro B J Biomol Struct Dyn; 2001 Dec; 19(3):381-96. PubMed ID: 11790138 [TBL] [Abstract][Full Text] [Related]
24. Is thermosensing property of RNA thermometers unique? Shah P; Gilchrist MA PLoS One; 2010 Jul; 5(7):e11308. PubMed ID: 20625392 [TBL] [Abstract][Full Text] [Related]
25. Detailed microscopic unfolding pathways of an α-helix and a β-hairpin: direct observation and molecular dynamics. Jas GS; Hegefeld WA; Middaugh CR; Johnson CK; Kuczera K J Phys Chem B; 2014 Jul; 118(26):7233-46. PubMed ID: 24897620 [TBL] [Abstract][Full Text] [Related]
28. Equilibrium unfolding (folding) pathway of a model H-type pseudoknotted RNA: the role of magnesium ions in stability. Nixon PL; Giedroc DP Biochemistry; 1998 Nov; 37(46):16116-29. PubMed ID: 9819204 [TBL] [Abstract][Full Text] [Related]
29. HIV-1(Lai) genomic RNA: combined used of NMR and molecular dynamics simulation for studying the structure and internal dynamics of a mutated SL1 hairpin. Kieken F; Arnoult E; Barbault F; Paquet F; Huynh-Dinh T; Paoletti J; Genest D; Lancelot G Eur Biophys J; 2002 Dec; 31(7):521-31. PubMed ID: 12451421 [TBL] [Abstract][Full Text] [Related]
30. Non-canonical Escherichia coli transcripts lacking a Shine-Dalgarno motif have very different translational efficiencies and do not form a coherent group. Ludwig P; Huber M; Lehr M; Wegener M; Zerulla K; Lange C; Soppa J Microbiology (Reading); 2018 Apr; 164(4):646-658. PubMed ID: 29469690 [TBL] [Abstract][Full Text] [Related]
31. Coevolution of RNA helix stability and Shine-Dalgarno complementarity in a translational start region. Olsthoorn RC; Zoog S; van Duin J Mol Microbiol; 1995 Jan; 15(2):333-9. PubMed ID: 7746154 [TBL] [Abstract][Full Text] [Related]
32. Structural features of a six-nucleotide RNA hairpin loop found in ribosomal RNA. Fountain MA; Serra MJ; Krugh TR; Turner DH Biochemistry; 1996 May; 35(21):6539-48. PubMed ID: 8639602 [TBL] [Abstract][Full Text] [Related]
33. RNA simulations: probing hairpin unfolding and the dynamics of a GNRA tetraloop. Sorin EJ; Engelhardt MA; Herschlag D; Pande VS J Mol Biol; 2002 Apr; 317(4):493-506. PubMed ID: 11955005 [TBL] [Abstract][Full Text] [Related]
34. Structure of a hexanucleotide RNA hairpin loop conserved in ribosomal RNAs. Huang S; Wang YX; Draper DE J Mol Biol; 1996 May; 258(2):308-21. PubMed ID: 8627628 [TBL] [Abstract][Full Text] [Related]
35. Modulation of the stability of the Salmonella fourU-type RNA thermometer. Rinnenthal J; Klinkert B; Narberhaus F; Schwalbe H Nucleic Acids Res; 2011 Oct; 39(18):8258-70. PubMed ID: 21727085 [TBL] [Abstract][Full Text] [Related]
36. RNA thermometers in bacteria: Role in thermoregulation. Sharma P; Mondal K; Kumar S; Tamang S; Najar IN; Das S; Thakur N Biochim Biophys Acta Gene Regul Mech; 2022 Oct; 1865(7):194871. PubMed ID: 36041664 [TBL] [Abstract][Full Text] [Related]
37. An RNA Molecular Switch: Intrinsic Flexibility of 23S rRNA Helices 40 and 68 5'-UAA/5'-GAN Internal Loops Studied by Molecular Dynamics Methods. Réblová K; Střelcová Z; Kulhánek P; Beššeová I; Mathews DH; Van Nostrand K; Yildirim I; Turner DH; Šponer J J Chem Theory Comput; 2010 Mar; 6(3):910-29. PubMed ID: 26613316 [TBL] [Abstract][Full Text] [Related]