BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

394 related articles for article (PubMed ID: 35549406)

  • 1. Cross-tissue immune cell analysis reveals tissue-specific features in humans.
    Domínguez Conde C; Xu C; Jarvis LB; Rainbow DB; Wells SB; Gomes T; Howlett SK; Suchanek O; Polanski K; King HW; Mamanova L; Huang N; Szabo PA; Richardson L; Bolt L; Fasouli ES; Mahbubani KT; Prete M; Tuck L; Richoz N; Tuong ZK; Campos L; Mousa HS; Needham EJ; Pritchard S; Li T; Elmentaite R; Park J; Rahmani E; Chen D; Menon DK; Bayraktar OA; James LK; Meyer KB; Yosef N; Clatworthy MR; Sims PA; Farber DL; Saeb-Parsy K; Jones JL; Teichmann SA
    Science; 2022 May; 376(6594):eabl5197. PubMed ID: 35549406
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Automatic cell-type harmonization and integration across Human Cell Atlas datasets.
    Xu C; Prete M; Webb S; Jardine L; Stewart BJ; Hoo R; He P; Meyer KB; Teichmann SA
    Cell; 2023 Dec; 186(26):5876-5891.e20. PubMed ID: 38134877
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Universal prediction of cell-cycle position using transfer learning.
    Zheng SC; Stein-O'Brien G; Augustin JJ; Slosberg J; Carosso GA; Winer B; Shin G; Bjornsson HT; Goff LA; Hansen KD
    Genome Biol; 2022 Jan; 23(1):41. PubMed ID: 35101061
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Single-cell systems-level analysis of human Toll-like receptor activation defines a chemokine signature in patients with systemic lupus erythematosus.
    O'Gorman WE; Hsieh EW; Savig ES; Gherardini PF; Hernandez JD; Hansmann L; Balboni IM; Utz PJ; Bendall SC; Fantl WJ; Lewis DB; Nolan GP; Davis MM
    J Allergy Clin Immunol; 2015 Nov; 136(5):1326-36. PubMed ID: 26037552
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A multi-organ map of the human immune system across age, sex and ethnicity.
    Mangiola S; Milton M; Ranathunga N; Li-Wai-Suen C; Odainic A; Yang E; Hutchison W; Garnham A; Iskander J; Pal B; Yadav V; Rossello J; Carey VJ; Morgan M; Bedoui S; Kallies A; Papenfuss AT
    bioRxiv; 2024 Apr; ():. PubMed ID: 38746418
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Single-nucleus cross-tissue molecular reference maps toward understanding disease gene function.
    Eraslan G; Drokhlyansky E; Anand S; Fiskin E; Subramanian A; Slyper M; Wang J; Van Wittenberghe N; Rouhana JM; Waldman J; Ashenberg O; Lek M; Dionne D; Win TS; Cuoco MS; Kuksenko O; Tsankov AM; Branton PA; Marshall JL; Greka A; Getz G; Segrè AV; Aguet F; Rozenblatt-Rosen O; Ardlie KG; Regev A
    Science; 2022 May; 376(6594):eabl4290. PubMed ID: 35549429
    [TBL] [Abstract][Full Text] [Related]  

  • 7. An integrated cell atlas of the lung in health and disease.
    Sikkema L; Ramírez-Suástegui C; Strobl DC; Gillett TE; Zappia L; Madissoon E; Markov NS; Zaragosi LE; Ji Y; Ansari M; Arguel MJ; Apperloo L; Banchero M; Bécavin C; Berg M; Chichelnitskiy E; Chung MI; Collin A; Gay ACA; Gote-Schniering J; Hooshiar Kashani B; Inecik K; Jain M; Kapellos TS; Kole TM; Leroy S; Mayr CH; Oliver AJ; von Papen M; Peter L; Taylor CJ; Walzthoeni T; Xu C; Bui LT; De Donno C; Dony L; Faiz A; Guo M; Gutierrez AJ; Heumos L; Huang N; Ibarra IL; Jackson ND; Kadur Lakshminarasimha Murthy P; Lotfollahi M; Tabib T; Talavera-López C; Travaglini KJ; Wilbrey-Clark A; Worlock KB; Yoshida M; ; van den Berge M; Bossé Y; Desai TJ; Eickelberg O; Kaminski N; Krasnow MA; Lafyatis R; Nikolic MZ; Powell JE; Rajagopal J; Rojas M; Rozenblatt-Rosen O; Seibold MA; Sheppard D; Shepherd DP; Sin DD; Timens W; Tsankov AM; Whitsett J; Xu Y; Banovich NE; Barbry P; Duong TE; Falk CS; Meyer KB; Kropski JA; Pe'er D; Schiller HB; Tata PR; Schultze JL; Teichmann SA; Misharin AV; Nawijn MC; Luecken MD; Theis FJ
    Nat Med; 2023 Jun; 29(6):1563-1577. PubMed ID: 37291214
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Best practices for single-cell analysis across modalities.
    Heumos L; Schaar AC; Lance C; Litinetskaya A; Drost F; Zappia L; Lücken MD; Strobl DC; Henao J; Curion F; ; Schiller HB; Theis FJ
    Nat Rev Genet; 2023 Aug; 24(8):550-572. PubMed ID: 37002403
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Mapping cell types across human tissues.
    Liu Z; Zhang Z
    Science; 2022 May; 376(6594):695-696. PubMed ID: 35549410
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Spatially resolved multiomics of human cardiac niches.
    Kanemaru K; Cranley J; Muraro D; Miranda AMA; Ho SY; Wilbrey-Clark A; Patrick Pett J; Polanski K; Richardson L; Litvinukova M; Kumasaka N; Qin Y; Jablonska Z; Semprich CI; Mach L; Dabrowska M; Richoz N; Bolt L; Mamanova L; Kapuge R; Barnett SN; Perera S; Talavera-López C; Mulas I; Mahbubani KT; Tuck L; Wang L; Huang MM; Prete M; Pritchard S; Dark J; Saeb-Parsy K; Patel M; Clatworthy MR; Hübner N; Chowdhury RA; Noseda M; Teichmann SA
    Nature; 2023 Jul; 619(7971):801-810. PubMed ID: 37438528
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The scverse project provides a computational ecosystem for single-cell omics data analysis.
    Virshup I; Bredikhin D; Heumos L; Palla G; Sturm G; Gayoso A; Kats I; Koutrouli M; ; Berger B; Pe'er D; Regev A; Teichmann SA; Finotello F; Wolf FA; Yosef N; Stegle O; Theis FJ
    Nat Biotechnol; 2023 May; 41(5):604-606. PubMed ID: 37037904
    [No Abstract]   [Full Text] [Related]  

  • 12. Inferring and perturbing cell fate regulomes in human brain organoids.
    Fleck JS; Jansen SMJ; Wollny D; Zenk F; Seimiya M; Jain A; Okamoto R; Santel M; He Z; Camp JG; Treutlein B
    Nature; 2023 Sep; 621(7978):365-372. PubMed ID: 36198796
    [TBL] [Abstract][Full Text] [Related]  

  • 13. An atlas of healthy and injured cell states and niches in the human kidney.
    Lake BB; Menon R; Winfree S; Hu Q; Melo Ferreira R; Kalhor K; Barwinska D; Otto EA; Ferkowicz M; Diep D; Plongthongkum N; Knoten A; Urata S; Mariani LH; Naik AS; Eddy S; Zhang B; Wu Y; Salamon D; Williams JC; Wang X; Balderrama KS; Hoover PJ; Murray E; Marshall JL; Noel T; Vijayan A; Hartman A; Chen F; Waikar SS; Rosas SE; Wilson FP; Palevsky PM; Kiryluk K; Sedor JR; Toto RD; Parikh CR; Kim EH; Satija R; Greka A; Macosko EZ; Kharchenko PV; Gaut JP; Hodgin JB; ; Eadon MT; Dagher PC; El-Achkar TM; Zhang K; Kretzler M; Jain S
    Nature; 2023 Jul; 619(7970):585-594. PubMed ID: 37468583
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Single-Cell Molecular Barcoding to Decode Multimodal Information Defining Cell States.
    Kim IS
    Mol Cells; 2023 Feb; 46(2):74-85. PubMed ID: 36859472
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Lineage tracing reveals fate bias and transcriptional memory in human B cells.
    Swift M; Horns F; Quake SR
    Life Sci Alliance; 2023 Mar; 6(3):. PubMed ID: 36639222
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A spatially resolved atlas of the human lung characterizes a gland-associated immune niche.
    Madissoon E; Oliver AJ; Kleshchevnikov V; Wilbrey-Clark A; Polanski K; Richoz N; Ribeiro Orsi A; Mamanova L; Bolt L; Elmentaite R; Pett JP; Huang N; Xu C; He P; Dabrowska M; Pritchard S; Tuck L; Prigmore E; Perera S; Knights A; Oszlanczi A; Hunter A; Vieira SF; Patel M; Lindeboom RGH; Campos LS; Matsuo K; Nakayama T; Yoshida M; Worlock KB; Nikolić MZ; Georgakopoulos N; Mahbubani KT; Saeb-Parsy K; Bayraktar OA; Clatworthy MR; Stegle O; Kumasaka N; Teichmann SA; Meyer KB
    Nat Genet; 2023 Jan; 55(1):66-77. PubMed ID: 36543915
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Tissue-specific features of the T cell repertoire after allogeneic hematopoietic cell transplantation in human and mouse.
    DeWolf S; Elhanati Y; Nichols K; Waters NR; Nguyen CL; Slingerland JB; Rodriguez N; Lyudovyk O; Giardina PA; Kousa AI; Andrlová H; Ceglia N; Fei T; Kappagantula R; Li Y; Aleynick N; Baez P; Murali R; Hayashi A; Lee N; Gipson B; Rangesa M; Katsamakis Z; Dai A; Blouin AG; Arcila M; Masilionis I; Chaligne R; Ponce DM; Landau HJ; Politikos I; Tamari R; Hanash AM; Jenq RR; Giralt SA; Markey KA; Zhang Y; Perales MA; Socci ND; Greenbaum BD; Iacobuzio-Donahue CA; Hollmann TJ; van den Brink MRM; Peled JU
    Sci Transl Med; 2023 Jul; 15(706):eabq0476. PubMed ID: 37494469
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Understanding tumour endothelial cell heterogeneity and function from single-cell omics.
    Zeng Q; Mousa M; Nadukkandy AS; Franssens L; Alnaqbi H; Alshamsi FY; Safar HA; Carmeliet P
    Nat Rev Cancer; 2023 Aug; 23(8):544-564. PubMed ID: 37349410
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Transfer learning enables predictions in network biology.
    Theodoris CV; Xiao L; Chopra A; Chaffin MD; Al Sayed ZR; Hill MC; Mantineo H; Brydon EM; Zeng Z; Liu XS; Ellinor PT
    Nature; 2023 Jun; 618(7965):616-624. PubMed ID: 37258680
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Spatial multiomics map of trophoblast development in early pregnancy.
    Arutyunyan A; Roberts K; Troulé K; Wong FCK; Sheridan MA; Kats I; Garcia-Alonso L; Velten B; Hoo R; Ruiz-Morales ER; Sancho-Serra C; Shilts J; Handfield LF; Marconato L; Tuck E; Gardner L; Mazzeo CI; Li Q; Kelava I; Wright GJ; Prigmore E; Teichmann SA; Bayraktar OA; Moffett A; Stegle O; Turco MY; Vento-Tormo R
    Nature; 2023 Apr; 616(7955):143-151. PubMed ID: 36991123
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 20.