These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

123 related articles for article (PubMed ID: 35573039)

  • 21. Nonlinear scoring functions for similarity-based ligand docking and binding affinity prediction.
    Brylinski M
    J Chem Inf Model; 2013 Nov; 53(11):3097-112. PubMed ID: 24171431
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Application of Machine Learning Techniques to Predict Binding Affinity for Drug Targets: A Study of Cyclin-Dependent Kinase 2.
    Bitencourt-Ferreira G; Duarte da Silva A; Filgueira de Azevedo W
    Curr Med Chem; 2021; 28(2):253-265. PubMed ID: 31729287
    [TBL] [Abstract][Full Text] [Related]  

  • 23. PSnpBind-ML: predicting the effect of binding site mutations on protein-ligand binding affinity.
    Ammar A; Cavill R; Evelo C; Willighagen E
    J Cheminform; 2023 Mar; 15(1):31. PubMed ID: 36864534
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Low-Quality Structural and Interaction Data Improves Binding Affinity Prediction via Random Forest.
    Li H; Leung KS; Wong MH; Ballester PJ
    Molecules; 2015 Jun; 20(6):10947-62. PubMed ID: 26076113
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Supervised Machine Learning Methods Applied to Predict Ligand- Binding Affinity.
    Heck GS; Pintro VO; Pereira RR; de Ávila MB; Levin NMB; de Azevedo WF
    Curr Med Chem; 2017; 24(23):2459-2470. PubMed ID: 28641555
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Machine-Learning- and Knowledge-Based Scoring Functions Incorporating Ligand and Protein Fingerprints.
    Fujimoto KJ; Minami S; Yanai T
    ACS Omega; 2022 Jun; 7(22):19030-19039. PubMed ID: 35694525
    [TBL] [Abstract][Full Text] [Related]  

  • 27. XLPFE: A Simple and Effective Machine Learning Scoring Function for Protein-Ligand Scoring and Ranking.
    Dong L; Qu X; Wang B
    ACS Omega; 2022 Jun; 7(25):21727-21735. PubMed ID: 35785279
    [TBL] [Abstract][Full Text] [Related]  

  • 28. PredPRBA: Prediction of Protein-RNA Binding Affinity Using Gradient Boosted Regression Trees.
    Deng L; Yang W; Liu H
    Front Genet; 2019; 10():637. PubMed ID: 31428122
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Machine Learning-Based Scoring Functions, Development and Applications with SAnDReS.
    Bitencourt-Ferreira G; Rizzotto C; de Azevedo Junior WF
    Curr Med Chem; 2021; 28(9):1746-1756. PubMed ID: 32410551
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Empirical Scoring Functions for Affinity Prediction of Protein-ligand Complexes.
    Pason LP; Sotriffer CA
    Mol Inform; 2016 Dec; 35(11-12):541-548. PubMed ID: 27870243
    [TBL] [Abstract][Full Text] [Related]  

  • 31. A Comparative Assessment of Predictive Accuracies of Conventional and Machine Learning Scoring Functions for Protein-Ligand Binding Affinity Prediction.
    Ashtawy HM; Mahapatra NR
    IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(2):335-47. PubMed ID: 26357221
    [TBL] [Abstract][Full Text] [Related]  

  • 32. The Impact of Protein Structure and Sequence Similarity on the Accuracy of Machine-Learning Scoring Functions for Binding Affinity Prediction.
    Li H; Peng J; Leung Y; Leung KS; Wong MH; Lu G; Ballester PJ
    Biomolecules; 2018 Mar; 8(1):. PubMed ID: 29538331
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Computationally predicting binding affinity in protein-ligand complexes: free energy-based simulations and machine learning-based scoring functions.
    Wang DD; Zhu M; Yan H
    Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32591817
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Binding affinity prediction for protein-ligand complex using deep attention mechanism based on intermolecular interactions.
    Seo S; Choi J; Park S; Ahn J
    BMC Bioinformatics; 2021 Nov; 22(1):542. PubMed ID: 34749664
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Learning from Docked Ligands: Ligand-Based Features Rescue Structure-Based Scoring Functions When Trained on Docked Poses.
    Boyles F; Deane CM; Morris GM
    J Chem Inf Model; 2022 Nov; 62(22):5329-5341. PubMed ID: 34469150
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Exploring QSAR models for activity-cliff prediction.
    Dablander M; Hanser T; Lambiotte R; Morris GM
    J Cheminform; 2023 Apr; 15(1):47. PubMed ID: 37069675
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A New Hybrid Neural Network Deep Learning Method for Protein-Ligand Binding Affinity Prediction and De Novo Drug Design.
    Limbu S; Dakshanamurthy S
    Int J Mol Sci; 2022 Nov; 23(22):. PubMed ID: 36430386
    [TBL] [Abstract][Full Text] [Related]  

  • 38. A comprehensive review and performance evaluation of bioinformatics tools for HLA class I peptide-binding prediction.
    Mei S; Li F; Leier A; Marquez-Lago TT; Giam K; Croft NP; Akutsu T; Smith AI; Li J; Rossjohn J; Purcell AW; Song J
    Brief Bioinform; 2020 Jul; 21(4):1119-1135. PubMed ID: 31204427
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Protein-ligand binding affinity prediction model based on graph attention network.
    Yuan H; Huang J; Li J
    Math Biosci Eng; 2021 Oct; 18(6):9148-9162. PubMed ID: 34814340
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Building Machine-Learning Scoring Functions for Structure-Based Prediction of Intermolecular Binding Affinity.
    Wójcikowski M; Siedlecki P; Ballester PJ
    Methods Mol Biol; 2019; 2053():1-12. PubMed ID: 31452095
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.