These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

170 related articles for article (PubMed ID: 35615740)

  • 21. Before and after AlphaFold2: An overview of protein structure prediction.
    Bertoline LMF; Lima AN; Krieger JE; Teixeira SK
    Front Bioinform; 2023; 3():1120370. PubMed ID: 36926275
    [TBL] [Abstract][Full Text] [Related]  

  • 22. NMR hawk-eyed view of AlphaFold2 structures.
    Zweckstetter M
    Protein Sci; 2021 Nov; 30(11):2333-2337. PubMed ID: 34469019
    [TBL] [Abstract][Full Text] [Related]  

  • 23. CombFold: predicting structures of large protein assemblies using a combinatorial assembly algorithm and AlphaFold2.
    Shor B; Schneidman-Duhovny D
    Nat Methods; 2024 Mar; 21(3):477-487. PubMed ID: 38326495
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Topology evaluation of models for difficult targets in the 14th round of the critical assessment of protein structure prediction (CASP14).
    Kinch LN; Pei J; Kryshtafovych A; Schaeffer RD; Grishin NV
    Proteins; 2021 Dec; 89(12):1673-1686. PubMed ID: 34240477
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Critical assessment of methods of protein structure prediction (CASP)-Round XV.
    Kryshtafovych A; Schwede T; Topf M; Fidelis K; Moult J
    Proteins; 2023 Dec; 91(12):1539-1549. PubMed ID: 37920879
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Real-time structure search and structure classification for AlphaFold protein models.
    Aderinwale T; Bharadwaj V; Christoffer C; Terashi G; Zhang Z; Jahandideh R; Kagaya Y; Kihara D
    Commun Biol; 2022 Apr; 5(1):316. PubMed ID: 35383281
    [TBL] [Abstract][Full Text] [Related]  

  • 27. AlphaFold2 and its applications in the fields of biology and medicine.
    Yang Z; Zeng X; Zhao Y; Chen R
    Signal Transduct Target Ther; 2023 Mar; 8(1):115. PubMed ID: 36918529
    [TBL] [Abstract][Full Text] [Related]  

  • 28. 3D-equivariant graph neural networks for protein model quality assessment.
    Chen C; Chen X; Morehead A; Wu T; Cheng J
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36637199
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Improving AlphaFold2-based protein tertiary structure prediction with MULTICOM in CASP15.
    Liu J; Guo Z; Wu T; Roy RS; Chen C; Cheng J
    Commun Chem; 2023 Sep; 6(1):188. PubMed ID: 37679431
    [TBL] [Abstract][Full Text] [Related]  

  • 30. AlphaFold2 versus experimental structures: evaluation on G protein-coupled receptors.
    He XH; You CZ; Jiang HL; Jiang Y; Xu HE; Cheng X
    Acta Pharmacol Sin; 2023 Jan; 44(1):1-7. PubMed ID: 35778488
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Family-wide analysis of integrin structures predicted by AlphaFold2.
    Zhang H; Zhu DS; Zhu J
    Comput Struct Biotechnol J; 2023; 21():4497-4507. PubMed ID: 37753178
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Protein oligomer structure prediction using GALAXY in CASP14.
    Park T; Woo H; Yang J; Kwon S; Won J; Seok C
    Proteins; 2021 Dec; 89(12):1844-1851. PubMed ID: 34363243
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).
    Foffi G; Pastore A; Piazza F; Temussi PA
    Phys Biol; 2013 Aug; 10(4):040301. PubMed ID: 23912807
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Assessing Fairness of AlphaFold2 Prediction of Protein 3D Structures.
    Abbas U; Chen J; Shao Q
    bioRxiv; 2023 May; ():. PubMed ID: 37293014
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Distance-AF: Modifying Predicted Protein Structure Models by Alphafold2 with User-Specified Distance Constraints.
    Zhang Y; Zhang Z; Kagaya Y; Terashi G; Zhao B; Xiong Y; Kihara D
    bioRxiv; 2023 Dec; ():. PubMed ID: 38106200
    [TBL] [Abstract][Full Text] [Related]  

  • 36. What Is the Crystallographic Resolution of Structural Models of Proteins Generated with AlphaFold2?
    Carugo O
    ACS Chem Biol; 2024 Oct; 19(10):2141-2143. PubMed ID: 39316643
    [TBL] [Abstract][Full Text] [Related]  

  • 37. How AlphaFold2 shaped the structural coverage of the human transmembrane proteome.
    Jambrich MA; Tusnady GE; Dobson L
    Sci Rep; 2023 Nov; 13(1):20283. PubMed ID: 37985809
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Deep learning-driven insights into super protein complexes for outer membrane protein biogenesis in bacteria.
    Gao M; Nakajima An D; Skolnick J
    Elife; 2022 Dec; 11():. PubMed ID: 36576775
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Predicting structures of large protein assemblies using combinatorial assembly algorithm and AlphaFold2.
    Shor B; Schneidman-Duhovny D
    bioRxiv; 2023 May; ():. PubMed ID: 37293053
    [TBL] [Abstract][Full Text] [Related]  

  • 40. AlphaFold2 Predicts Whether Proteins Interact Amidst Confounding Structural Compatibility.
    Martin J
    J Chem Inf Model; 2024 Mar; 64(5):1473-1480. PubMed ID: 38373070
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 9.