BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

160 related articles for article (PubMed ID: 35621046)

  • 1. Intra-genomic rRNA gene variability of Nassellaria and Spumellaria (Rhizaria, Radiolaria) assessed by Sanger, MinION and Illumina sequencing.
    Sandin MM; Romac S; Not F
    Environ Microbiol; 2022 Jul; 24(7):2979-2993. PubMed ID: 35621046
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Intracellular diversity of the V4 and V9 regions of the 18S rRNA in marine protists (radiolarians) assessed by high-throughput sequencing.
    Decelle J; Romac S; Sasaki E; Not F; Mahé F
    PLoS One; 2014; 9(8):e104297. PubMed ID: 25090095
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Radiolaria divided into Polycystina and Spasmaria in combined 18S and 28S rDNA phylogeny.
    Krabberød AK; Bråte J; Dolven JK; Ose RF; Klaveness D; Kristensen T; Bjørklund KR; Shalchian-Tabrizi K
    PLoS One; 2011; 6(8):e23526. PubMed ID: 21853146
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Nanopore sequencing of long ribosomal DNA amplicons enables portable and simple biodiversity assessments with high phylogenetic resolution across broad taxonomic scale.
    Krehenwinkel H; Pomerantz A; Henderson JB; Kennedy SR; Lim JY; Swamy V; Shoobridge JD; Graham N; Patel NH; Gillespie RG; Prost S
    Gigascience; 2019 May; 8(5):. PubMed ID: 30824940
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A Morpho-molecular Perspective on the Diversity and Evolution of Spumellaria (Radiolaria).
    Sandin MM; Biard T; Romac S; O'Dogherty L; Suzuki N; Not F
    Protist; 2021 Jul; 172(3):125806. PubMed ID: 34174720
    [TBL] [Abstract][Full Text] [Related]  

  • 6. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
    Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
    Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Proof of concept for multiplex amplicon sequencing for mutation identification using the MinION nanopore sequencer.
    Whitford W; Hawkins V; Moodley KS; Grant MJ; Lehnert K; Snell RG; Jacobsen JC
    Sci Rep; 2022 May; 12(1):8572. PubMed ID: 35595858
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Time Calibrated Morpho-molecular Classification of Nassellaria (Radiolaria).
    Sandin MM; Pillet L; Biard T; Poirier C; Bigeard E; Romac S; Suzuki N; Not F
    Protist; 2019 Apr; 170(2):187-208. PubMed ID: 31055251
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing.
    Goldstein S; Beka L; Graf J; Klassen JL
    BMC Genomics; 2019 Jan; 20(1):23. PubMed ID: 30626323
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A full-length 18S ribosomal DNA metabarcoding approach for determining protist community diversity using Nanopore sequencing.
    Gaonkar CC; Campbell L
    Ecol Evol; 2024 Apr; 14(4):e11232. PubMed ID: 38606340
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comparing DNA isolation and sequencing strategies for 16S rRNA gene amplicon analysis in biofilm containing environments.
    Cakin I; Morrissey B; Gordon M; Gaffney PPJ; Marcello L; Macgregor K; Taggart MA
    J Microbiol Methods; 2024 May; 220():106921. PubMed ID: 38494090
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformis.
    Baeza JA; García-De León FJ
    BMC Genomics; 2022 Apr; 23(1):320. PubMed ID: 35459089
    [TBL] [Abstract][Full Text] [Related]  

  • 13. MinION Sequencing of Yeast Mock Communities To Assess the Effect of Databases and ITS-LSU Markers on the Reliability of Metabarcoding Analysis.
    Conti A; Casagrande Pierantoni D; Robert V; Corte L; Cardinali G
    Microbiol Spectr; 2023 Feb; 11(1):e0105222. PubMed ID: 36519933
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Characterization of MinION nanopore data for resequencing analyses.
    Magi A; Giusti B; Tattini L
    Brief Bioinform; 2017 Nov; 18(6):940-953. PubMed ID: 27559152
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Genome assembly using Nanopore-guided long and error-free DNA reads.
    Madoui MA; Engelen S; Cruaud C; Belser C; Bertrand L; Alberti A; Lemainque A; Wincker P; Aury JM
    BMC Genomics; 2015 Apr; 16(1):327. PubMed ID: 25927464
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia.
    Hugerth LW; Muller EE; Hu YO; Lebrun LA; Roume H; Lundin D; Wilmes P; Andersson AF
    PLoS One; 2014; 9(4):e95567. PubMed ID: 24755918
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Comparative analyses of the V4 and V9 regions of 18S rDNA for the extant eukaryotic community using the Illumina platform.
    Choi J; Park JS
    Sci Rep; 2020 Apr; 10(1):6519. PubMed ID: 32300168
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota.
    Heikema AP; Horst-Kreft D; Boers SA; Jansen R; Hiltemann SD; de Koning W; Kraaij R; de Ridder MAJ; van Houten CB; Bont LJ; Stubbs AP; Hays JP
    Genes (Basel); 2020 Sep; 11(9):. PubMed ID: 32967250
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Haptophyte Diversity and Vertical Distribution Explored by 18S and 28S Ribosomal RNA Gene Metabarcoding and Scanning Electron Microscopy.
    Gran-Stadniczeñko S; Šupraha L; Egge ED; Edvardsen B
    J Eukaryot Microbiol; 2017 Jul; 64(4):514-532. PubMed ID: 27973742
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Long-read metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity.
    Jamy M; Foster R; Barbera P; Czech L; Kozlov A; Stamatakis A; Bending G; Hilton S; Bass D; Burki F
    Mol Ecol Resour; 2020 Mar; 20(2):429-443. PubMed ID: 31705734
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.