BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

146 related articles for article (PubMed ID: 35627292)

  • 41. Improved splice site detection in Genie.
    Reese MG; Eeckman FH; Kulp D; Haussler D
    J Comput Biol; 1997; 4(3):311-23. PubMed ID: 9278062
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Comparative analysis of sequence features involved in the recognition of tandem splice sites.
    Bortfeldt R; Schindler S; Szafranski K; Schuster S; Holste D
    BMC Genomics; 2008 Apr; 9():202. PubMed ID: 18447903
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Periodicity of DNA in exons.
    Eskesen ST; Eskesen FN; Kinghorn B; Ruvinsky A
    BMC Mol Biol; 2004 Aug; 5():12. PubMed ID: 15315715
    [TBL] [Abstract][Full Text] [Related]  

  • 44. SpliceRover: interpretable convolutional neural networks for improved splice site prediction.
    Zuallaert J; Godin F; Kim M; Soete A; Saeys Y; De Neve W
    Bioinformatics; 2018 Dec; 34(24):4180-4188. PubMed ID: 29931149
    [TBL] [Abstract][Full Text] [Related]  

  • 45. Using multiple alignments to improve gene prediction.
    Gross SS; Brent MR
    J Comput Biol; 2006 Mar; 13(2):379-93. PubMed ID: 16597247
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Imprecise excision of the Caenorhabditis elegans transposon Tc1 creates functional 5' splice sites.
    Carr B; Anderson P
    Mol Cell Biol; 1994 May; 14(5):3426-33. PubMed ID: 7513051
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Spliceator: multi-species splice site prediction using convolutional neural networks.
    Scalzitti N; Kress A; Orhand R; Weber T; Moulinier L; Jeannin-Girardon A; Collet P; Poch O; Thompson JD
    BMC Bioinformatics; 2021 Nov; 22(1):561. PubMed ID: 34814826
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Complex selection on 5' splice sites in intron-rich organisms.
    Irimia M; Roy SW; Neafsey DE; Abril JF; Garcia-Fernandez J; Koonin EV
    Genome Res; 2009 Nov; 19(11):2021-7. PubMed ID: 19745111
    [TBL] [Abstract][Full Text] [Related]  

  • 49. tRNA-DL: A Deep Learning Approach to Improve tRNAscan-SE Prediction Results.
    Gao X; Wei Z; Hakonarson H
    Hum Hered; 2018; 83(3):163-172. PubMed ID: 30685762
    [TBL] [Abstract][Full Text] [Related]  

  • 50. RASE: recognition of alternatively spliced exons in C.elegans.
    Rätsch G; Sonnenburg S; Schölkopf B
    Bioinformatics; 2005 Jun; 21 Suppl 1():i369-77. PubMed ID: 15961480
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Computational discovery of internal micro-exons.
    Volfovsky N; Haas BJ; Salzberg SL
    Genome Res; 2003 Jun; 13(6A):1216-21. PubMed ID: 12799353
    [TBL] [Abstract][Full Text] [Related]  

  • 52. Genie--gene finding in Drosophila melanogaster.
    Reese MG; Kulp D; Tammana H; Haussler D
    Genome Res; 2000 Apr; 10(4):529-38. PubMed ID: 10779493
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Coordinated tissue-specific regulation of adjacent alternative 3' splice sites in C. elegans.
    Ragle JM; Katzman S; Akers TF; Barberan-Soler S; Zahler AM
    Genome Res; 2015 Jul; 25(7):982-94. PubMed ID: 25922281
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Exonization of transposed elements: A challenge and opportunity for evolution.
    Schmitz J; Brosius J
    Biochimie; 2011 Nov; 93(11):1928-34. PubMed ID: 21787833
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Kassiopeia: a database and web application for the analysis of mutually exclusive exomes of eukaryotes.
    Hatje K; Kollmar M
    BMC Genomics; 2014 Feb; 15():115. PubMed ID: 24507667
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Ordered partitioning reveals extended splice-site consensus information.
    Weir M; Rice M
    Genome Res; 2004 Jan; 14(1):67-78. PubMed ID: 14707171
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Eukaryotic and prokaryotic promoter prediction using hybrid approach.
    Lin H; Li QZ
    Theory Biosci; 2011 Jun; 130(2):91-100. PubMed ID: 21046474
    [TBL] [Abstract][Full Text] [Related]  

  • 58. An approach of encoding for prediction of splice sites using SVM.
    Huang J; Li T; Chen K; Wu J
    Biochimie; 2006 Jul; 88(7):923-9. PubMed ID: 16626852
    [TBL] [Abstract][Full Text] [Related]  

  • 59. Identification of human gene structure using linear discriminant functions and dynamic programming.
    Solovyev VV; Salamov AA; Lawrence CB
    Proc Int Conf Intell Syst Mol Biol; 1995; 3():367-75. PubMed ID: 7584460
    [TBL] [Abstract][Full Text] [Related]  

  • 60. LeNup: learning nucleosome positioning from DNA sequences with improved convolutional neural networks.
    Zhang J; Peng W; Wang L
    Bioinformatics; 2018 May; 34(10):1705-1712. PubMed ID: 29329398
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.