175 related articles for article (PubMed ID: 35664803)
1. tRForest: a novel random forest-based algorithm for tRNA-derived fragment target prediction.
Parikh R; Wilson B; Marrah L; Su Z; Saha S; Kumar P; Huang F; Dutta A
NAR Genom Bioinform; 2022 Jun; 4(2):lqac037. PubMed ID: 35664803
[TBL] [Abstract][Full Text] [Related]
2. tRFTars: predicting the targets of tRNA-derived fragments.
Xiao Q; Gao P; Huang X; Chen X; Chen Q; Lv X; Fu Y; Song Y; Wang Z
J Transl Med; 2021 Feb; 19(1):88. PubMed ID: 33632236
[TBL] [Abstract][Full Text] [Related]
3. tRNA fragments (tRFs) guide Ago to regulate gene expression post-transcriptionally in a Dicer-independent manner.
Kuscu C; Kumar P; Kiran M; Su Z; Malik A; Dutta A
RNA; 2018 Aug; 24(8):1093-1105. PubMed ID: 29844106
[TBL] [Abstract][Full Text] [Related]
4. Genome-wide identification and characterization of tRNA-derived RNA fragments in land plants.
Alves CS; Vicentini R; Duarte GT; Pinoti VF; Vincentz M; Nogueira FT
Plant Mol Biol; 2017 Jan; 93(1-2):35-48. PubMed ID: 27681945
[TBL] [Abstract][Full Text] [Related]
5. Dynamics of tRNA fragments and their targets in aging mammalian brain.
Karaiskos S; Grigoriev A
F1000Res; 2016; 5():. PubMed ID: 28105302
[No Abstract] [Full Text] [Related]
6. Expression profiles and function prediction of tRNA-derived fragments in glioma.
Wei D; Niu B; Zhai B; Liu XB; Yao YL; Liang CC; Wang P
BMC Cancer; 2023 Oct; 23(1):1015. PubMed ID: 37864150
[TBL] [Abstract][Full Text] [Related]
7. tRFTar: Prediction of tRF-target gene interactions via systemic re-analysis of Argonaute CLIP-seq datasets.
Zhou Y; Peng H; Cui Q; Zhou Y
Methods; 2021 Mar; 187():57-67. PubMed ID: 33045361
[TBL] [Abstract][Full Text] [Related]
8. A novel class of small RNAs: tRNA-derived RNA fragments (tRFs).
Lee YS; Shibata Y; Malhotra A; Dutta A
Genes Dev; 2009 Nov; 23(22):2639-49. PubMed ID: 19933153
[TBL] [Abstract][Full Text] [Related]
9. tRNA-derived fragments (tRFs) regulate post-transcriptional gene expression via AGO-dependent mechanism in IL-1β stimulated chondrocytes.
Green JA; Ansari MY; Ball HC; Haqqi TM
Osteoarthritis Cartilage; 2020 Aug; 28(8):1102-1110. PubMed ID: 32407895
[TBL] [Abstract][Full Text] [Related]
10. A comprehensive expression profile of tRNA-derived fragments in papillary thyroid cancer.
Shan S; Wang Y; Zhu C
J Clin Lab Anal; 2021 Mar; 35(3):e23664. PubMed ID: 33332661
[TBL] [Abstract][Full Text] [Related]
11. Analysis of tRNA-derived RNA fragments (tRFs) in Cryptococcus spp.: RNAi-independent generation and possible compensatory effects in a RNAi-deficient genotype.
Streit RSA; Ferrareze PAG; Vainstein MH; Staats CC
Fungal Biol; 2021 May; 125(5):389-399. PubMed ID: 33910680
[TBL] [Abstract][Full Text] [Related]
12. Expression of tiRNA and tRF in
Lu H; Liu L; Han S; Wang B; Qin J; Bu K; Zhang Y; Li Z; Ma L; Tian J; Zhang K; Li T; Cui H; Liu X
Ann Transl Med; 2021 Sep; 9(18):1457. PubMed ID: 34734009
[TBL] [Abstract][Full Text] [Related]
13. Differentially expressed tRNA-derived fragments in bovine fetuses with assisted reproduction induced congenital overgrowth syndrome.
Goldkamp AK; Li Y; Rivera RM; Hagen DE
Front Genet; 2022; 13():1055343. PubMed ID: 36457750
[No Abstract] [Full Text] [Related]
14. MINTbase: a framework for the interactive exploration of mitochondrial and nuclear tRNA fragments.
Pliatsika V; Loher P; Telonis AG; Rigoutsos I
Bioinformatics; 2016 Aug; 32(16):2481-9. PubMed ID: 27153631
[TBL] [Abstract][Full Text] [Related]
15. Precise mapping and dynamics of tRNA-derived fragments (tRFs) in the development of Triops cancriformis (tadpole shrimp).
Hirose Y; Ikeda KT; Noro E; Hiraoka K; Tomita M; Kanai A
BMC Genet; 2015 Jul; 16():83. PubMed ID: 26168920
[TBL] [Abstract][Full Text] [Related]
16. A novel tRNA-derived fragment tRF-3022b modulates cell apoptosis and M2 macrophage polarization via binding to cytokines in colorectal cancer.
Lu S; Wei X; Tao L; Dong D; Hu W; Zhang Q; Tao Y; Yu C; Sun D; Cheng H
J Hematol Oncol; 2022 Dec; 15(1):176. PubMed ID: 36527118
[TBL] [Abstract][Full Text] [Related]
17. tRFtarget: a database for transfer RNA-derived fragment targets.
Li N; Shan N; Lu L; Wang Z
Nucleic Acids Res; 2021 Jan; 49(D1):D254-D260. PubMed ID: 33035346
[TBL] [Abstract][Full Text] [Related]
18. Extensive profiling of the expressions of tRNAs and tRNA-derived fragments (tRFs) reveals the complexities of tRNA and tRF populations in plants.
Ma X; Liu C; Kong X; Liu J; Zhang S; Liang S; Luan W; Cao X
Sci China Life Sci; 2021 Apr; 64(4):495-511. PubMed ID: 33569675
[TBL] [Abstract][Full Text] [Related]
19. Differential Expression Profiles and Function Predictions for tRFs & tiRNAs in Skin Injury Induced by Ultraviolet Irradiation.
Fang Y; Liu Y; Yan Y; Shen Y; Li Z; Li X; Zhang Y; Xue Z; Peng C; Chen X; Cao K; Zhou J
Front Cell Dev Biol; 2021; 9():707572. PubMed ID: 34447751
[TBL] [Abstract][Full Text] [Related]
20. Meta-analysis of tRNA derived RNA fragments reveals that they are evolutionarily conserved and associate with AGO proteins to recognize specific RNA targets.
Kumar P; Anaya J; Mudunuri SB; Dutta A
BMC Biol; 2014 Oct; 12():78. PubMed ID: 25270025
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
