These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

129 related articles for article (PubMed ID: 35678677)

  • 1. Whole-Transcriptome Profiling on Small FFPE Samples: Which Sequencing Kit Should Be Used?
    Hilmi M; Armenoult L; Ayadi M; Nicolle R
    Curr Issues Mol Biol; 2022 May; 44(5):2186-2193. PubMed ID: 35678677
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparison of Two Illumina Whole Transcriptome RNA Sequencing Library Preparation Methods Using Human Cancer FFPE Specimens.
    Wang D; Rolfe PA; Foernzler D; O'Rourke D; Zhao S; Scheuenpflug J; Feng Z
    Technol Cancer Res Treat; 2022; 21():15330338221076304. PubMed ID: 35138205
    [No Abstract]   [Full Text] [Related]  

  • 3. Application of the 3' mRNA-Seq using unique molecular identifiers in highly degraded RNA derived from formalin-fixed, paraffin-embedded tissue.
    Jang JS; Holicky E; Lau J; McDonough S; Mutawe M; Koster MJ; Warrington KJ; Cuninngham JM
    BMC Genomics; 2021 Oct; 22(1):759. PubMed ID: 34689749
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Functional comparison of exome capture-based methods for transcriptomic profiling of formalin-fixed paraffin-embedded tumors.
    Shohdy KS; Bareja R; Sigouros M; Wilkes DC; Dorsaint P; Manohar J; Bockelman D; Xiang JZ; Kim R; Ohara K; Eng K; Mosquera JM; Elemento O; Sboner A; Alonso A; Faltas BM
    NPJ Genom Med; 2021 Aug; 6(1):66. PubMed ID: 34385467
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RNA Extraction Method Impacts Quality Metrics and Sequencing Results in Formalin-Fixed, Paraffin-Embedded Tissue Samples.
    Decruyenaere P; Verniers K; Poma-Soto F; Van Dorpe J; Offner F; Vandesompele J
    Lab Invest; 2023 Feb; 103(2):100027. PubMed ID: 37039153
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues.
    Marczyk M; Fu C; Lau R; Du L; Trevarton AJ; Sinn BV; Gould RE; Pusztai L; Hatzis C; Symmans WF
    BMC Cancer; 2019 Dec; 19(1):1189. PubMed ID: 31805884
    [TBL] [Abstract][Full Text] [Related]  

  • 7. RNA-seq RNAaccess identified as the preferred method for gene expression analysis of low quality FFPE samples.
    Song K; Elboudwarej E; Zhao X; Zhuo L; Pan D; Liu J; Brachmann C; Patterson SD; Yoon OK; Zavodovskaya M
    PLoS One; 2023; 18(10):e0293400. PubMed ID: 37883360
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Whole-Transcriptome profiling of formalin-fixed, paraffin-embedded renal cell carcinoma by RNA-seq.
    Li P; Conley A; Zhang H; Kim HL
    BMC Genomics; 2014 Dec; 15(1):1087. PubMed ID: 25495041
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Performance comparison of two commercial human whole-exome capture systems on formalin-fixed paraffin-embedded lung adenocarcinoma samples.
    Bonfiglio S; Vanni I; Rossella V; Truini A; Lazarevic D; Dal Bello MG; Alama A; Mora M; Rijavec E; Genova C; Cittaro D; Grossi F; Coco S
    BMC Cancer; 2016 Aug; 16(1):692. PubMed ID: 27578032
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Systematic analysis of TruSeq, SMARTer and SMARTer Ultra-Low RNA-seq kits for standard, low and ultra-low quantity samples.
    Palomares MA; Dalmasso C; Bonnet E; Derbois C; Brohard-Julien S; Ambroise C; Battail C; Deleuze JF; Olaso R
    Sci Rep; 2019 May; 9(1):7550. PubMed ID: 31101892
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Case study: Targeted RNA-sequencing of aged formalin-fixed paraffin-embedded samples for understanding chemical mode of action.
    Cannizzo MD; Wood CE; Hester SD; Wehmas LC
    Toxicol Rep; 2022; 9():883-894. PubMed ID: 36518475
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A comparative analysis of library prep approaches for sequencing low input translatome samples.
    Song Y; Milon B; Ott S; Zhao X; Sadzewicz L; Shetty A; Boger ET; Tallon LJ; Morell RJ; Mahurkar A; Hertzano R
    BMC Genomics; 2018 Sep; 19(1):696. PubMed ID: 30241496
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Whole exome sequencing (WES) on formalin-fixed, paraffin-embedded (FFPE) tumor tissue in gastrointestinal stromal tumors (GIST).
    Astolfi A; Urbini M; Indio V; Nannini M; Genovese CG; Santini D; Saponara M; Mandrioli A; Ercolani G; Brandi G; Biasco G; Pantaleo MA
    BMC Genomics; 2015 Nov; 16():892. PubMed ID: 26531060
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A comprehensive assessment of exome capture methods for RNA sequencing of formalin-fixed and paraffin-embedded samples.
    Zong L; Zhu Y; Jiang Y; Xia Y; Liu Q; Jiang S
    BMC Genomics; 2023 Dec; 24(1):777. PubMed ID: 38102591
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Validation of the Complexity INdex in SARComas prognostic signature on formalin-fixed, paraffin-embedded, soft-tissue sarcomas.
    Le Guellec S; Lesluyes T; Sarot E; Valle C; Filleron T; Rochaix P; Valentin T; Pérot G; Coindre JM; Chibon F
    Ann Oncol; 2018 Aug; 29(8):1828-1835. PubMed ID: 29860427
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling.
    Zhao W; He X; Hoadley KA; Parker JS; Hayes DN; Perou CM
    BMC Genomics; 2014 Jun; 15(1):419. PubMed ID: 24888378
    [TBL] [Abstract][Full Text] [Related]  

  • 17. mRNA-seq whole transcriptome profiling of fresh frozen versus archived fixed tissues.
    Bossel Ben-Moshe N; Gilad S; Perry G; Benjamin S; Balint-Lahat N; Pavlovsky A; Halperin S; Markus B; Yosepovich A; Barshack I; Gal-Yam EN; Domany E; Kaufman B; Dadiani M
    BMC Genomics; 2018 May; 19(1):419. PubMed ID: 29848287
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Performance comparison of three DNA extraction kits on human whole-exome data from formalin-fixed paraffin-embedded normal and tumor samples.
    Bonnet E; Moutet ML; Baulard C; Bacq-Daian D; Sandron F; Mesrob L; Fin B; Delépine M; Palomares MA; Jubin C; Blanché H; Meyer V; Boland A; Olaso R; Deleuze JF
    PLoS One; 2018; 13(4):e0195471. PubMed ID: 29621323
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Comparison of whole-exome sequencing of matched fresh and formalin fixed paraffin embedded melanoma tumours: implications for clinical decision making.
    De Paoli-Iseppi R; Johansson PA; Menzies AM; Dias KR; Pupo GM; Kakavand H; Wilmott JS; Mann GJ; Hayward NK; Dinger ME; Long GV; Scolyer RA
    Pathology; 2016 Apr; 48(3):261-6. PubMed ID: 27020503
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Study on the use of Nanostring nCounter to analyze RNA extracted from formalin-fixed-paraffin-embedded and fresh frozen bladder cancer tissues.
    Zheng CM; Piao XM; Byun YJ; Song SJ; Kim SK; Moon SK; Choi YH; Kang HW; Kim WT; Kim YJ; Lee SC; Kim WJ; Yun SJ
    Cancer Genet; 2022 Nov; 268-269():137-143. PubMed ID: 36368127
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.