279 related articles for article (PubMed ID: 35682854)
1. Interaction of Proteins with Inverted Repeats and Cruciform Structures in Nucleic Acids.
Bowater RP; Bohálová N; Brázda V
Int J Mol Sci; 2022 May; 23(11):. PubMed ID: 35682854
[TBL] [Abstract][Full Text] [Related]
2. Inverted repeats, stem-loops, and cruciforms: significance for initiation of DNA replication.
Pearson CE; Zorbas H; Price GB; Zannis-Hadjopoulos M
J Cell Biochem; 1996 Oct; 63(1):1-22. PubMed ID: 8891900
[TBL] [Abstract][Full Text] [Related]
3. Cruciform structures are a common DNA feature important for regulating biological processes.
Brázda V; Laister RC; Jagelská EB; Arrowsmith C
BMC Mol Biol; 2011 Aug; 12():33. PubMed ID: 21816114
[TBL] [Abstract][Full Text] [Related]
4. Palindrome analyser - A new web-based server for predicting and evaluating inverted repeats in nucleotide sequences.
Brázda V; Kolomazník J; Lýsek J; Hároníková L; Coufal J; Št'astný J
Biochem Biophys Res Commun; 2016 Sep; 478(4):1739-45. PubMed ID: 27603574
[TBL] [Abstract][Full Text] [Related]
5. DNA inverted repeats and human disease.
Bissler JJ
Front Biosci; 1998 Mar; 3():d408-18. PubMed ID: 9516381
[TBL] [Abstract][Full Text] [Related]
6. Cruciform-forming inverted repeats appear to have mediated many of the microinversions that distinguish the human and chimpanzee genomes.
Kolb J; Chuzhanova NA; Högel J; Vasquez KM; Cooper DN; Bacolla A; Kehrer-Sawatzki H
Chromosome Res; 2009; 17(4):469-83. PubMed ID: 19475482
[TBL] [Abstract][Full Text] [Related]
7. Torsionally tuned cruciform and Z-DNA probes for measuring unrestrained supercoiling at specific sites in DNA of living cells.
Zheng GX; Kochel T; Hoepfner RW; Timmons SE; Sinden RR
J Mol Biol; 1991 Sep; 221(1):107-22. PubMed ID: 1920399
[TBL] [Abstract][Full Text] [Related]
8. Effects of salts, temperature, and stem length on supercoil-induced formation of cruciforms.
Singleton CK
J Biol Chem; 1983 Jun; 258(12):7661-8. PubMed ID: 6863259
[TBL] [Abstract][Full Text] [Related]
9. Effect of base composition at the center of inverted repeated DNA sequences on cruciform transitions in DNA.
Zheng GX; Sinden RR
J Biol Chem; 1988 Apr; 263(11):5356-61. PubMed ID: 3356690
[TBL] [Abstract][Full Text] [Related]
10. Requirement or exclusion of inverted repeat sequences with cruciform-forming potential in Escherichia coli revealed by genome-wide analyses.
Miura O; Ogake T; Ohyama T
Curr Genet; 2018 Aug; 64(4):945-958. PubMed ID: 29484452
[TBL] [Abstract][Full Text] [Related]
11. Preferential binding of p53 tumor suppressor to p21 promoter sites that contain inverted repeats capable of forming cruciform structure.
Coufal J; Jagelská EB; Liao JC; Brázda V
Biochem Biophys Res Commun; 2013 Nov; 441(1):83-8. PubMed ID: 24134839
[TBL] [Abstract][Full Text] [Related]
12. The potential of the cruciform structure formation as an important factor influencing p53 sequence-specific binding to natural DNA targets.
Jagelská EB; Pivonková H; Fojta M; Brázda V
Biochem Biophys Res Commun; 2010 Jan; 391(3):1409-14. PubMed ID: 20026061
[TBL] [Abstract][Full Text] [Related]
13. Structural parameters of palindromic repeats determine the specificity of nuclease attack of secondary structures.
Ait Saada A; Costa AB; Sheng Z; Guo W; Haber JE; Lobachev KS
Nucleic Acids Res; 2021 Apr; 49(7):3932-3947. PubMed ID: 33772579
[TBL] [Abstract][Full Text] [Related]
14. Nonspaced inverted DNA repeats are preferential targets for homology-directed gene repair in mammalian cells.
Holkers M; de Vries AA; Gonçalves MA
Nucleic Acids Res; 2012 Mar; 40(5):1984-99. PubMed ID: 22080552
[TBL] [Abstract][Full Text] [Related]
15. Interarm interaction of DNA cruciform forming at a short inverted repeat sequence.
Kato M; Hokabe S; Itakura S; Minoshima S; Lyubchenko YL; Gurkov TD; Okawara H; Nagayama K; Shimizu N
Biophys J; 2003 Jul; 85(1):402-8. PubMed ID: 12829494
[TBL] [Abstract][Full Text] [Related]
16. Influence of global DNA topology on cruciform formation in supercoiled DNA.
Oussatcheva EA; Pavlicek J; Sankey OF; Sinden RR; Lyubchenko YL; Potaman VN
J Mol Biol; 2004 May; 338(4):735-43. PubMed ID: 15099741
[TBL] [Abstract][Full Text] [Related]
17. A cruciform-dumbbell model for inverted dimer formation mediated by inverted repeats.
Lin CT; Lyu YL; Liu LF
Nucleic Acids Res; 1997 Aug; 25(15):3009-16. PubMed ID: 9224600
[TBL] [Abstract][Full Text] [Related]
18. Structure and dynamics of supercoil-stabilized DNA cruciforms.
Shlyakhtenko LS; Potaman VN; Sinden RR; Lyubchenko YL
J Mol Biol; 1998 Jul; 280(1):61-72. PubMed ID: 9653031
[TBL] [Abstract][Full Text] [Related]
19. Cruciform DNA Structures Act as Legible Templates for Accelerating Homologous Recombination in Transgenic Animals.
Ou-Yang H; Yang SH; Chen W; Yang SH; Cidem A; Sung LY; Chen CM
Int J Mol Sci; 2022 Apr; 23(7):. PubMed ID: 35409332
[TBL] [Abstract][Full Text] [Related]
20. On the deletion of inverted repeated DNA in Escherichia coli: effects of length, thermal stability, and cruciform formation in vivo.
Sinden RR; Zheng GX; Brankamp RG; Allen KN
Genetics; 1991 Dec; 129(4):991-1005. PubMed ID: 1783300
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
