277 related articles for article (PubMed ID: 35733020)
1. Bioinformatics Methods for ChIP-seq Histone Analysis.
Servant N
Methods Mol Biol; 2022; 2529():267-293. PubMed ID: 35733020
[TBL] [Abstract][Full Text] [Related]
2. Quantitative Comparison of Multiple Chromatin Immunoprecipitation-Sequencing (ChIP-seq) Experiments with spikChIP.
Blanco E; Ballaré C; Di Croce L; Aranda S
Methods Mol Biol; 2023; 2624():55-72. PubMed ID: 36723809
[TBL] [Abstract][Full Text] [Related]
3. Chromatin Immunoprecipitation and High-Throughput Sequencing (ChIP-Seq): Tips and Tricks Regarding the Laboratory Protocol and Initial Downstream Data Analysis.
Patten DK; Corleone G; Magnani L
Methods Mol Biol; 2018; 1767():271-288. PubMed ID: 29524141
[TBL] [Abstract][Full Text] [Related]
4. Native internally calibrated chromatin immunoprecipitation for quantitative studies of histone post-translational modifications.
Grzybowski AT; Shah RN; Richter WF; Ruthenburg AJ
Nat Protoc; 2019 Dec; 14(12):3275-3302. PubMed ID: 31723301
[TBL] [Abstract][Full Text] [Related]
5. Protocol to apply spike-in ChIP-seq to capture massive histone acetylation in human cells.
Wu D; Wang L; Huang H
STAR Protoc; 2021 Sep; 2(3):100681. PubMed ID: 34337446
[TBL] [Abstract][Full Text] [Related]
6. Unified Analysis of Multiple ChIP-Seq Datasets.
Ma G; Babarinde IA; Zhuang Q; Hutchins AP
Methods Mol Biol; 2021; 2198():451-465. PubMed ID: 32822050
[TBL] [Abstract][Full Text] [Related]
7. A High-Throughput Chromatin Immunoprecipitation Sequencing Approach to Study the Role of MYC on the Epigenetic Landscape.
Fagnocchi L; Zippo A
Methods Mol Biol; 2021; 2318():187-208. PubMed ID: 34019291
[TBL] [Abstract][Full Text] [Related]
8. Statistical Analysis in ChIP-seq-Related Applications.
Teng M
Methods Mol Biol; 2023; 2629():169-181. PubMed ID: 36929078
[TBL] [Abstract][Full Text] [Related]
9. Chromatin Immunoprecipitation Sequencing (ChIP-seq) for Detecting Histone Modifications and Modifiers.
Hino S; Sato T; Nakao M
Methods Mol Biol; 2023; 2577():55-64. PubMed ID: 36173565
[TBL] [Abstract][Full Text] [Related]
10. Genome-Wide Identification of Transcription Factor-Binding Sites in Quiescent Adult Neural Stem Cells.
Mukherjee S; Hsieh J
Methods Mol Biol; 2018; 1686():265-286. PubMed ID: 29030827
[TBL] [Abstract][Full Text] [Related]
11. Profiling Histone Methylation in Low Numbers of Cells.
Brind'Amour J; Lorincz MC
Methods Mol Biol; 2022; 2529():229-251. PubMed ID: 35733018
[TBL] [Abstract][Full Text] [Related]
12. Genome-wide mapping of nucleosome occupancy, histone modifications, and gene expression using next-generation sequencing technology.
Wei G; Hu G; Cui K; Zhao K
Methods Enzymol; 2012; 513():297-313. PubMed ID: 22929775
[TBL] [Abstract][Full Text] [Related]
13. Analysis of Histone Modifications in Acute Myeloid Leukaemia Using Chromatin Immunoprecipitation.
Shields BJ; Keniry A; Blewitt ME; McCormack MP
Methods Mol Biol; 2018; 1725():177-184. PubMed ID: 29322418
[TBL] [Abstract][Full Text] [Related]
14. Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input.
Handa T; Harada A; Maehara K; Sato S; Nakao M; Goto N; Kurumizaka H; Ohkawa Y; Kimura H
Nat Protoc; 2020 Oct; 15(10):3334-3360. PubMed ID: 32807906
[TBL] [Abstract][Full Text] [Related]
15. ChIP-seq Data Processing for PcG Proteins and Associated Histone Modifications.
Bogdanovic O; van Heeringen SJ
Methods Mol Biol; 2016; 1480():37-53. PubMed ID: 27659973
[TBL] [Abstract][Full Text] [Related]
16. Analysis of Myc Chromatin Binding by Calibrated ChIP-Seq Approach.
Cameron DP; Kuzin V; Baranello L
Methods Mol Biol; 2021; 2318():161-185. PubMed ID: 34019290
[TBL] [Abstract][Full Text] [Related]
17. Analyzing histone ChIP-seq data with a bin-based probability of being signal.
Hecht V; Dong K; Rajesh S; Shpilker P; Wekhande S; Shoresh N
PLoS Comput Biol; 2023 Oct; 19(10):e1011568. PubMed ID: 37862349
[TBL] [Abstract][Full Text] [Related]
18. HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data.
Yan H; Evans J; Kalmbach M; Moore R; Middha S; Luban S; Wang L; Bhagwate A; Li Y; Sun Z; Chen X; Kocher JP
BMC Bioinformatics; 2014 Aug; 15(1):280. PubMed ID: 25128017
[TBL] [Abstract][Full Text] [Related]
19. Software for rapid time dependent ChIP-sequencing analysis (TDCA).
Myschyshyn M; Farren-Dai M; Chuang TJ; Vocadlo D
BMC Bioinformatics; 2017 Nov; 18(1):521. PubMed ID: 29178831
[TBL] [Abstract][Full Text] [Related]
20. DiffChIPL: a differential peak analysis method for high-throughput sequencing data with biological replicates based on limma.
Chen Y; Chen S; Lei EP
Bioinformatics; 2022 Sep; 38(17):4062-4069. PubMed ID: 35809062
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]