These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
163 related articles for article (PubMed ID: 35751023)
1. Predicting the pathogenicity of bacterial genomes using widely spread protein families. Naor-Hoffmann S; Svetlitsky D; Sal-Man N; Orenstein Y; Ziv-Ukelson M BMC Bioinformatics; 2022 Jun; 23(1):253. PubMed ID: 35751023 [TBL] [Abstract][Full Text] [Related]
2. Forest and Trees: Exploring Bacterial Virulence with Genome-wide Association Studies and Machine Learning. Allen JP; Snitkin E; Pincus NB; Hauser AR Trends Microbiol; 2021 Jul; 29(7):621-633. PubMed ID: 33455849 [TBL] [Abstract][Full Text] [Related]
3. Comparative genomic analysis identifies divergent genomic features of pathogenic Enterococcus cecorum including a type IC CRISPR-Cas system, a capsule locus, an epa-like locus, and putative host tissue binding proteins. Borst LB; Suyemoto MM; Scholl EH; Fuller FJ; Barnes HJ PLoS One; 2015; 10(4):e0121294. PubMed ID: 25860249 [TBL] [Abstract][Full Text] [Related]
4. Using the genome to understand pathogenicity. Field D; Hughes J; Moxon ER Methods Mol Biol; 2004; 266():261-87. PubMed ID: 15148423 [TBL] [Abstract][Full Text] [Related]
5. [Plasticity of bacterial genomes: pathogenicity islands and the locus of enterocyte effacement (LEE)]. Kirsch P; Jores J; Wieler LH Berl Munch Tierarztl Wochenschr; 2004; 117(3-4):116-29. PubMed ID: 15046458 [TBL] [Abstract][Full Text] [Related]
6. Phylogenetic relationship and virulence inference of Streptococcus Anginosus Group: curated annotation and whole-genome comparative analysis support distinct species designation. Olson AB; Kent H; Sibley CD; Grinwis ME; Mabon P; Ouellette C; Tyson S; Graham M; Tyler SD; Van Domselaar G; Surette MG; Corbett CR BMC Genomics; 2013 Dec; 14():895. PubMed ID: 24341328 [TBL] [Abstract][Full Text] [Related]
7. Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss. den Bakker HC; Cummings CA; Ferreira V; Vatta P; Orsi RH; Degoricija L; Barker M; Petrauskene O; Furtado MR; Wiedmann M BMC Genomics; 2010 Dec; 11():688. PubMed ID: 21126366 [TBL] [Abstract][Full Text] [Related]
8. YersiniaBase: a genomic resource and analysis platform for comparative analysis of Yersinia. Tan SY; Dutta A; Jakubovics NS; Ang MY; Siow CC; Mutha NV; Heydari H; Wee WY; Wong GJ; Choo SW BMC Bioinformatics; 2015 Jan; 16(1):9. PubMed ID: 25591325 [TBL] [Abstract][Full Text] [Related]
9. Comparative genomics evidence that only protein toxins are tagging bad bugs. Georgiades K; Raoult D Front Cell Infect Microbiol; 2011; 1():7. PubMed ID: 22919573 [TBL] [Abstract][Full Text] [Related]
10. Comparative genomics analysis to differentiate metabolic and virulence gene potential in gastric versus enterohepatic Helicobacter species. Mannion A; Shen Z; Fox JG BMC Genomics; 2018 Nov; 19(1):830. PubMed ID: 30458713 [TBL] [Abstract][Full Text] [Related]
12. Benchmarking Long-Read Assemblers for Genomic Analyses of Bacterial Pathogens Using Oxford Nanopore Sequencing. Chen Z; Erickson DL; Meng J Int J Mol Sci; 2020 Dec; 21(23):. PubMed ID: 33271875 [TBL] [Abstract][Full Text] [Related]
13. Evolutionary Dynamics Based on Comparative Genomics of Pathogenic Escherichia coli Lineages Harboring Polyketide Synthase ( Suresh A; Shaik S; Baddam R; Ranjan A; Qumar S; Jadhav S; Semmler T; Ghazi IA; Wieler LH; Ahmed N mBio; 2021 Mar; 12(1):. PubMed ID: 33653937 [TBL] [Abstract][Full Text] [Related]
14. Genomic Epidemiology and Evolution of Murphy R; Palm M; Mustonen V; Warringer J; Farewell A; Parts L; Moradigaravand D mSphere; 2021 Jan; 6(1):. PubMed ID: 33408222 [No Abstract] [Full Text] [Related]
15. PathogenFinder--distinguishing friend from foe using bacterial whole genome sequence data. Cosentino S; Voldby Larsen M; Møller Aarestrup F; Lund O PLoS One; 2013; 8(10):e77302. PubMed ID: 24204795 [TBL] [Abstract][Full Text] [Related]
16. Encyclopedia of bacterial gene circuits whose presence or absence correlate with pathogenicity--a large-scale system analysis of decoded bacterial genomes. Shestov M; Ontañón S; Tozeren A BMC Genomics; 2015 Oct; 16():773. PubMed ID: 26459834 [TBL] [Abstract][Full Text] [Related]
17. Postgenomic analysis of bacterial pathogens repertoire reveals genome reduction rather than virulence factors. Merhej V; Georgiades K; Raoult D Brief Funct Genomics; 2013 Jul; 12(4):291-304. PubMed ID: 23814139 [TBL] [Abstract][Full Text] [Related]
18. Preliminary comparative genomics revealed pathogenic potential and international spread of Staphylococcus argenteus. Zhang DF; Zhi XY; Zhang J; Paoli GC; Cui Y; Shi C; Shi X BMC Genomics; 2017 Oct; 18(1):808. PubMed ID: 29058585 [TBL] [Abstract][Full Text] [Related]
19. Using functional genomics to decipher the complexity of microbial pathogenicity. Laabei M; Massey R Curr Genet; 2016 Aug; 62(3):523-5. PubMed ID: 26898530 [TBL] [Abstract][Full Text] [Related]
20. DeepVF: a deep learning-based hybrid framework for identifying virulence factors using the stacking strategy. Xie R; Li J; Wang J; Dai W; Leier A; Marquez-Lago TT; Akutsu T; Lithgow T; Song J; Zhang Y Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32599617 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]