These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

126 related articles for article (PubMed ID: 35753694)

  • 21. Benchmarking bioinformatic virus identification tools using real-world metagenomic data across biomes.
    Wu LY; Wijesekara Y; Piedade GJ; Pappas N; Brussaard CPD; Dutilh BE
    Genome Biol; 2024 Apr; 25(1):97. PubMed ID: 38622738
    [TBL] [Abstract][Full Text] [Related]  

  • 22. From deep sequencing to viral tagging: recent advances in viral metagenomics.
    Willner D; Hugenholtz P
    Bioessays; 2013 May; 35(5):436-42. PubMed ID: 23450659
    [TBL] [Abstract][Full Text] [Related]  

  • 23. The mouse Gene Expression Database (GXD): 2021 update.
    Baldarelli RM; Smith CM; Finger JH; Hayamizu TF; McCright IJ; Xu J; Shaw DR; Beal JS; Blodgett O; Campbell J; Corbani LE; Frost PJ; Giannatto SC; Miers DB; Kadin JA; Richardson JE; Ringwald M
    Nucleic Acids Res; 2021 Jan; 49(D1):D924-D931. PubMed ID: 33104772
    [TBL] [Abstract][Full Text] [Related]  

  • 24. VirStrain: a strain identification tool for RNA viruses.
    Liao H; Cai D; Sun Y
    Genome Biol; 2022 Jan; 23(1):38. PubMed ID: 35101081
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Metagenomics and the Human Virome in Asymptomatic Individuals.
    Rascovan N; Duraisamy R; Desnues C
    Annu Rev Microbiol; 2016 Sep; 70():125-41. PubMed ID: 27607550
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Enhanced bioinformatic profiling of VIDISCA libraries for virus detection and discovery.
    Kinsella CM; Deijs M; van der Hoek L
    Virus Res; 2019 Apr; 263():21-26. PubMed ID: 30578804
    [TBL] [Abstract][Full Text] [Related]  

  • 27. VIP: an integrated pipeline for metagenomics of virus identification and discovery.
    Li Y; Wang H; Nie K; Zhang C; Zhang Y; Wang J; Niu P; Ma X
    Sci Rep; 2016 Mar; 6():23774. PubMed ID: 27026381
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Detecting viral sequences in NGS data.
    Cantalupo PG; Pipas JM
    Curr Opin Virol; 2019 Dec; 39():41-48. PubMed ID: 31465960
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Metagenomics for the study of viruses in urban sewage as a tool for public health surveillance.
    Fernandez-Cassi X; Timoneda N; Martínez-Puchol S; Rusiñol M; Rodriguez-Manzano J; Figuerola N; Bofill-Mas S; Abril JF; Girones R
    Sci Total Environ; 2018 Mar; 618():870-880. PubMed ID: 29108696
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Virus Pop-Expanding Viral Databases by Protein Sequence Simulation.
    Kende J; Bonomi M; Temmam S; Regnault B; Pérot P; Eloit M; Bigot T
    Viruses; 2023 May; 15(6):. PubMed ID: 37376527
    [TBL] [Abstract][Full Text] [Related]  

  • 31. The RNASeq-er API-a gateway to systematically updated analysis of public RNA-seq data.
    Petryszak R; Fonseca NA; Füllgrabe A; Huerta L; Keays M; Tang YA; Brazma A
    Bioinformatics; 2017 Jul; 33(14):2218-2220. PubMed ID: 28369191
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Contaminating viral sequences in high-throughput sequencing viromics: a linkage study of 700 sequencing libraries.
    Asplund M; Kjartansdóttir KR; Mollerup S; Vinner L; Fridholm H; Herrera JAR; Friis-Nielsen J; Hansen TA; Jensen RH; Nielsen IB; Richter SR; Rey-Iglesia A; Matey-Hernandez ML; Alquezar-Planas DE; Olsen PVS; Sicheritz-Pontén T; Willerslev E; Lund O; Brunak S; Mourier T; Nielsen LP; Izarzugaza JMG; Hansen AJ
    Clin Microbiol Infect; 2019 Oct; 25(10):1277-1285. PubMed ID: 31059795
    [TBL] [Abstract][Full Text] [Related]  

  • 33. MiCoP: microbial community profiling method for detecting viral and fungal organisms in metagenomic samples.
    LaPierre N; Mangul S; Alser M; Mandric I; Wu NC; Koslicki D; Eskin E
    BMC Genomics; 2019 Jun; 20(Suppl 5):423. PubMed ID: 31167634
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Combining Analysis of DNA in a Crude Virion Extraction with the Analysis of RNA from Infected Leaves to Discover New Virus Genomes.
    Verchot J; Thapa A; Wijayasekara D; Hoyt PR
    J Vis Exp; 2018 Jul; (137):. PubMed ID: 30102276
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Unbiased Detection of Respiratory Viruses by Use of RNA Sequencing-Based Metagenomics: a Systematic Comparison to a Commercial PCR Panel.
    Graf EH; Simmon KE; Tardif KD; Hymas W; Flygare S; Eilbeck K; Yandell M; Schlaberg R
    J Clin Microbiol; 2016 Apr; 54(4):1000-7. PubMed ID: 26818672
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Applications of next-generation sequencing technologies to diagnostic virology.
    Barzon L; Lavezzo E; Militello V; Toppo S; Palù G
    Int J Mol Sci; 2011; 12(11):7861-84. PubMed ID: 22174638
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Adventitious Virus Detection in Cells by High-Throughput Sequencing of Newly Synthesized RNAs: Unambiguous Differentiation of Cell Infection from Carryover of Viral Nucleic Acids.
    Cheval J; Muth E; Gonzalez G; Coulpier M; Beurdeley P; Cruveiller S; Eloit M
    mSphere; 2019 Jun; 4(3):. PubMed ID: 31167947
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Advances in the application of high-throughput sequencing in invertebrate virology.
    van Aerle R; Santos EM
    J Invertebr Pathol; 2017 Jul; 147():145-156. PubMed ID: 28249815
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Virus characterization and discovery in formalin-fixed paraffin-embedded tissues.
    Bodewes R; van Run PR; Schürch AC; Koopmans MP; Osterhaus AD; Baumgärtner W; Kuiken T; Smits SL
    J Virol Methods; 2015 Mar; 214():54-9. PubMed ID: 25681526
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Viral Pathogen Detection by Metagenomics and Pan-Viral Group Polymerase Chain Reaction in Children With Pneumonia Lacking Identifiable Etiology.
    Schlaberg R; Queen K; Simmon K; Tardif K; Stockmann C; Flygare S; Kennedy B; Voelkerding K; Bramley A; Zhang J; Eilbeck K; Yandell M; Jain S; Pavia AT; Tong S; Ampofo K
    J Infect Dis; 2017 May; 215(9):1407-1415. PubMed ID: 28368491
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.