167 related articles for article (PubMed ID: 35788065)
1. Limited Evidence for Protein Products of Noncoding Transcripts in the HEK293T Cellular Cytosol.
Bogaert A; Fijalkowska D; Staes A; Van de Steene T; Demol H; Gevaert K
Mol Cell Proteomics; 2022 Aug; 21(8):100264. PubMed ID: 35788065
[TBL] [Abstract][Full Text] [Related]
2. Global analysis of ribosome-associated noncoding RNAs unveils new modes of translational regulation.
Bazin J; Baerenfaller K; Gosai SJ; Gregory BD; Crespi M; Bailey-Serres J
Proc Natl Acad Sci U S A; 2017 Nov; 114(46):E10018-E10027. PubMed ID: 29087317
[TBL] [Abstract][Full Text] [Related]
3. Ribosome profiling reveals pervasive translation outside of annotated protein-coding genes.
Ingolia NT; Brar GA; Stern-Ginossar N; Harris MS; Talhouarne GJ; Jackson SE; Wills MR; Weissman JS
Cell Rep; 2014 Sep; 8(5):1365-79. PubMed ID: 25159147
[TBL] [Abstract][Full Text] [Related]
4. Not lost in host translation: The new roles of long noncoding RNAs in infectious diseases.
Reisacher C; Arbibe L
Cell Microbiol; 2019 Nov; 21(11):e13119. PubMed ID: 31634981
[TBL] [Abstract][Full Text] [Related]
5. Pateamine A-sensitive ribosome profiling reveals the scope of translation in mouse embryonic stem cells.
Popa A; Lebrigand K; Barbry P; Waldmann R
BMC Genomics; 2016 Jan; 17():52. PubMed ID: 26764022
[TBL] [Abstract][Full Text] [Related]
6. Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins.
Guttman M; Russell P; Ingolia NT; Weissman JS; Lander ES
Cell; 2013 Jul; 154(1):240-51. PubMed ID: 23810193
[TBL] [Abstract][Full Text] [Related]
7. Detecting actively translated open reading frames in ribosome profiling data.
Calviello L; Mukherjee N; Wyler E; Zauber H; Hirsekorn A; Selbach M; Landthaler M; Obermayer B; Ohler U
Nat Methods; 2016 Feb; 13(2):165-70. PubMed ID: 26657557
[TBL] [Abstract][Full Text] [Related]
8. Translation of small downstream ORFs enhances translation of canonical main open reading frames.
Wu Q; Wright M; Gogol MM; Bradford WD; Zhang N; Bazzini AA
EMBO J; 2020 Sep; 39(17):e104763. PubMed ID: 32744758
[TBL] [Abstract][Full Text] [Related]
9. Ribosomal profiling adds new coding sequences to the proteome.
Mumtaz MA; Couso JP
Biochem Soc Trans; 2015 Dec; 43(6):1271-6. PubMed ID: 26614672
[TBL] [Abstract][Full Text] [Related]
10. Exploring the Peptide Potential of Genomes.
Papadopoulos C; Chevrollier N; Lopes A
Methods Mol Biol; 2022; 2405():63-82. PubMed ID: 35298808
[TBL] [Abstract][Full Text] [Related]
11. Identification of novel translated small ORFs in
Stringer A; Smith C; Mangano K; Wade JT
J Bacteriol; 2021 Jan; 204(1):JB0035221. PubMed ID: 34662240
[TBL] [Abstract][Full Text] [Related]
12. Discovery of noncanonical translation initiation sites through mass spectrometric analysis of protein N termini.
Na CH; Barbhuiya MA; Kim MS; Verbruggen S; Eacker SM; Pletnikova O; Troncoso JC; Halushka MK; Menschaert G; Overall CM; Pandey A
Genome Res; 2018 Jan; 28(1):25-36. PubMed ID: 29162641
[TBL] [Abstract][Full Text] [Related]
13. Widespread stable noncanonical peptides identified by integrated analyses of ribosome profiling and ORF features.
Yang H; Li Q; Stroup EK; Wang S; Ji Z
Nat Commun; 2024 Mar; 15(1):1932. PubMed ID: 38431639
[TBL] [Abstract][Full Text] [Related]
14. Pervasive functional translation of noncanonical human open reading frames.
Chen J; Brunner AD; Cogan JZ; Nuñez JK; Fields AP; Adamson B; Itzhak DN; Li JY; Mann M; Leonetti MD; Weissman JS
Science; 2020 Mar; 367(6482):1140-1146. PubMed ID: 32139545
[TBL] [Abstract][Full Text] [Related]
15. RibORF: Identifying Genome-Wide Translated Open Reading Frames Using Ribosome Profiling.
Ji Z
Curr Protoc Mol Biol; 2018 Oct; 124(1):e67. PubMed ID: 30178897
[TBL] [Abstract][Full Text] [Related]
16. Common and phylogenetically widespread coding for peptides by bacterial small RNAs.
Friedman RC; Kalkhof S; Doppelt-Azeroual O; Mueller SA; Chovancová M; von Bergen M; Schwikowski B
BMC Genomics; 2017 Jul; 18(1):553. PubMed ID: 28732463
[TBL] [Abstract][Full Text] [Related]
17. Long non-coding RNAs as a source of new peptides.
Ruiz-Orera J; Messeguer X; Subirana JA; Alba MM
Elife; 2014 Sep; 3():e03523. PubMed ID: 25233276
[TBL] [Abstract][Full Text] [Related]
18. Improved super-resolution ribosome profiling reveals prevalent translation of upstream ORFs and small ORFs in Arabidopsis.
Wu HL; Ai Q; Teixeira RT; Nguyen PHT; Song G; Montes C; Elmore JM; Walley JW; Hsu PY
Plant Cell; 2024 Feb; 36(3):510-539. PubMed ID: 38000896
[TBL] [Abstract][Full Text] [Related]
19. Discovering Putative Peptides Encoded from Noncoding RNAs in Ribosome Profiling Data of Arabidopsis thaliana.
Li Q; Ahsan MA; Chen H; Xue J; Chen M
ACS Synth Biol; 2018 Feb; 7(2):655-663. PubMed ID: 29376339
[TBL] [Abstract][Full Text] [Related]
20. Translation and natural selection of micropeptides from long non-canonical RNAs.
Patraquim P; Magny EG; Pueyo JI; Platero AI; Couso JP
Nat Commun; 2022 Oct; 13(1):6515. PubMed ID: 36316320
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
