BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

169 related articles for article (PubMed ID: 35789009)

  • 1. Spruce giga-genomes: structurally similar yet distinctive with differentially expanding gene families and rapidly evolving genes.
    Gagalova KK; Warren RL; Coombe L; Wong J; Nip KM; Yuen MMS; Whitehill JGA; Celedon JM; Ritland C; Taylor GA; Cheng D; Plettner P; Hammond SA; Mohamadi H; Zhao Y; Moore RA; Mungall AJ; Boyle B; Laroche J; Cottrell J; Mackay JJ; Lamothe M; Gérardi S; Isabel N; Pavy N; Jones SJM; Bohlmann J; Bousquet J; Birol I
    Plant J; 2022 Sep; 111(5):1469-1485. PubMed ID: 35789009
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis).
    Ralph SG; Chun HJ; Kolosova N; Cooper D; Oddy C; Ritland CE; Kirkpatrick R; Moore R; Barber S; Holt RA; Jones SJ; Marra MA; Douglas CJ; Ritland K; Bohlmann J
    BMC Genomics; 2008 Oct; 9():484. PubMed ID: 18854048
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Generation, functional annotation and comparative analysis of black spruce (Picea mariana) ESTs: an important conifer genomic resource.
    Mann IK; Wegrzyn JL; Rajora OP
    BMC Genomics; 2013 Oct; 14():702. PubMed ID: 24119028
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Transcriptome mining, functional characterization, and phylogeny of a large terpene synthase gene family in spruce (Picea spp.).
    Keeling CI; Weisshaar S; Ralph SG; Jancsik S; Hamberger B; Dullat HK; Bohlmann J
    BMC Plant Biol; 2011 Mar; 11():43. PubMed ID: 21385377
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers.
    Pavy N; Pelgas B; Laroche J; Rigault P; Isabel N; Bousquet J
    BMC Biol; 2012 Oct; 10():84. PubMed ID: 23102090
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The landscape of nucleotide polymorphism among 13,500 genes of the conifer picea glauca, relationships with functions, and comparison with medicago truncatula.
    Pavy N; Deschênes A; Blais S; Lavigne P; Beaulieu J; Isabel N; Mackay J; Bousquet J
    Genome Biol Evol; 2013; 5(10):1910-25. PubMed ID: 24065735
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Assembly and annotation of the black spruce genome provide insights on spruce phylogeny and evolution of stress response.
    Lo T; Coombe L; Gagalova KK; Marr A; Warren RL; Kirk H; Pandoh P; Zhao Y; Moore RA; Mungall AJ; Ritland C; Pavy N; Jones SJM; Bohlmann J; Bousquet J; Birol I; Thomson A
    G3 (Bethesda); 2023 Dec; 14(1):. PubMed ID: 37875130
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Dirigent proteins in conifer defense: gene discovery, phylogeny, and differential wound- and insect-induced expression of a family of DIR and DIR-like genes in spruce (Picea spp.).
    Ralph S; Park JY; Bohlmann J; Mansfield SD
    Plant Mol Biol; 2006 Jan; 60(1):21-40. PubMed ID: 16463097
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Insights into conifer giga-genomes.
    De La Torre AR; Birol I; Bousquet J; Ingvarsson PK; Jansson S; Jones SJ; Keeling CI; MacKay J; Nilsson O; Ritland K; Street N; Yanchuk A; Zerbe P; Bohlmann J
    Plant Physiol; 2014 Dec; 166(4):1724-32. PubMed ID: 25349325
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A conifer genome spruces up plant phylogenomics.
    Soltis PS; Soltis DE
    Genome Biol; 2013 Jun; 14(6):122. PubMed ID: 23805854
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism.
    Warren RL; Keeling CI; Yuen MM; Raymond A; Taylor GA; Vandervalk BP; Mohamadi H; Paulino D; Chiu R; Jackman SD; Robertson G; Yang C; Boyle B; Hoffmann M; Weigel D; Nelson DR; Ritland C; Isabel N; Jaquish B; Yanchuk A; Bousquet J; Jones SJ; MacKay J; Birol I; Bohlmann J
    Plant J; 2015 Jul; 83(2):189-212. PubMed ID: 26017574
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Expression Divergence Is Correlated with Sequence Evolution but Not Positive Selection in Conifers.
    Hodgins KA; Yeaman S; Nurkowski KA; Rieseberg LH; Aitken SN
    Mol Biol Evol; 2016 Jun; 33(6):1502-16. PubMed ID: 26873578
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Transcriptome profiling in conifers and the PiceaGenExpress database show patterns of diversification within gene families and interspecific conservation in vascular gene expression.
    Raherison E; Rigault P; Caron S; Poulin PL; Boyle B; Verta JP; Giguère I; Bomal C; Bohlmann J; MacKay J
    BMC Genomics; 2012 Aug; 13():434. PubMed ID: 22931377
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Conifer defence against insects: microarray gene expression profiling of Sitka spruce (Picea sitchensis) induced by mechanical wounding or feeding by spruce budworms (Choristoneura occidentalis) or white pine weevils (Pissodes strobi) reveals large-scale changes of the host transcriptome.
    Ralph SG; Yueh H; Friedmann M; Aeschliman D; Zeznik JA; Nelson CC; Butterfield YS; Kirkpatrick R; Liu J; Jones SJ; Marra MA; Douglas CJ; Ritland K; Bohlmann J
    Plant Cell Environ; 2006 Aug; 29(8):1545-70. PubMed ID: 16898017
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: application to the large and unsequenced genomes of white spruce and black spruce.
    Pavy N; Pelgas B; Beauseigle S; Blais S; Gagnon F; Gosselin I; Lamothe M; Isabel N; Bousquet J
    BMC Genomics; 2008 Jan; 9():21. PubMed ID: 18205909
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Targeted isolation, sequence assembly and characterization of two white spruce (Picea glauca) BAC clones for terpenoid synthase and cytochrome P450 genes involved in conifer defence reveal insights into a conifer genome.
    Hamberger B; Hall D; Yuen M; Oddy C; Hamberger B; Keeling CI; Ritland C; Ritland K; Bohlmann J
    BMC Plant Biol; 2009 Aug; 9():106. PubMed ID: 19656416
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A high-resolution reference genetic map positioning 8.8 K genes for the conifer white spruce: structural genomics implications and correspondence with physical distance.
    Pavy N; Lamothe M; Pelgas B; Gagnon F; Birol I; Bohlmann J; Mackay J; Isabel N; Bousquet J
    Plant J; 2017 Apr; 90(1):189-203. PubMed ID: 28090692
    [TBL] [Abstract][Full Text] [Related]  

  • 18. CNVs into the wild: screening the genomes of conifer trees (Picea spp.) reveals fewer gene copy number variations in hybrids and links to adaptation.
    Prunier J; Caron S; MacKay J
    BMC Genomics; 2017 Jan; 18(1):97. PubMed ID: 28100184
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Development of a highly efficient 50K single nucleotide polymorphism genotyping array for the large and complex genome of Norway spruce (Picea abies L. Karst) by whole genome resequencing and its transferability to other spruce species.
    Bernhardsson C; Zan Y; Chen Z; Ingvarsson PK; Wu HX
    Mol Ecol Resour; 2021 Apr; 21(3):880-896. PubMed ID: 33179386
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Exome capture from the spruce and pine giga-genomes.
    Suren H; Hodgins KA; Yeaman S; Nurkowski KA; Smets P; Rieseberg LH; Aitken SN; Holliday JA
    Mol Ecol Resour; 2016 Sep; 16(5):1136-46. PubMed ID: 27428061
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.