These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

124 related articles for article (PubMed ID: 35796729)

  • 1. Utilizing paralogues for phylogenetic reconstruction has the potential to increase species tree support and reduce gene tree discordance in target enrichment data.
    Ufimov R; Gorospe JM; Fér T; Kandziora M; Salomon L; van Loo M; Schmickl R
    Mol Ecol Resour; 2022 Nov; 22(8):3018-3034. PubMed ID: 35796729
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Relative performance of customized and universal probe sets in target enrichment: A case study in subtribe Malinae.
    Ufimov R; Zeisek V; Píšová S; Baker WJ; Fér T; van Loo M; Dobeš C; Schmickl R
    Appl Plant Sci; 2021 Jul; 9(7):e11442. PubMed ID: 34336405
    [TBL] [Abstract][Full Text] [Related]  

  • 3. How to Tackle Phylogenetic Discordance in Recent and Rapidly Radiating Groups? Developing a Workflow Using
    Kandziora M; Sklenář P; Kolář F; Schmickl R
    Front Plant Sci; 2021; 12():765719. PubMed ID: 35069621
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Lineage-specific vs. universal: A comparison of the Compositae1061 and Angiosperms353 enrichment panels in the sunflower family.
    Siniscalchi CM; Hidalgo O; Palazzesi L; Pellicer J; Pokorny L; Maurin O; Leitch IJ; Forest F; Baker WJ; Mandel JR
    Appl Plant Sci; 2021 Jul; 9(7):. PubMed ID: 34336403
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Analysis of Paralogs in Target Enrichment Data Pinpoints Multiple Ancient Polyploidy Events in Alchemilla s.l. (Rosaceae).
    Morales-Briones DF; Gehrke B; Huang CH; Liston A; Ma H; Marx HE; Tank DC; Yang Y
    Syst Biol; 2021 Dec; 71(1):190-207. PubMed ID: 33978764
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Phylogenomics and morphology of Celmisiinae (Asteraceae: Astereae): Taxonomic and evolutionary implications.
    Nicol DA; Saldivia P; Summerfield TC; Heads M; Lord JM; Khaing EP; Larcombe MJ
    Mol Phylogenet Evol; 2024 Jun; 195():108064. PubMed ID: 38508479
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Effectiveness of Two Universal Angiosperm Probe Sets Tested In Silico for Caryophyllids Taxa with Emphasis on Cacti Species.
    Chincoya DA; Solórzano S
    Genes (Basel); 2022 Mar; 13(4):. PubMed ID: 35456376
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Using Genomic Location and Coalescent Simulation to Investigate Gene Tree Discordance in Medicago L.
    Sousa F; Bertrand YJK; Doyle JJ; Oxelman B; Pfeil BE
    Syst Biol; 2017 Nov; 66(6):934-949. PubMed ID: 28177088
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Species Tree Inference Methods Intended to Deal with Incomplete Lineage Sorting Are Robust to the Presence of Paralogs.
    Yan Z; Smith ML; Du P; Hahn MW; Nakhleh L
    Syst Biol; 2022 Feb; 71(2):367-381. PubMed ID: 34245291
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Identification and assessment of variable single-copy orthologous (SCO) nuclear loci for low-level phylogenomics: a case study in the genus Rosa (Rosaceae).
    Debray K; Marie-Magdelaine J; Ruttink T; Clotault J; Foucher F; Malécot V
    BMC Evol Biol; 2019 Jul; 19(1):152. PubMed ID: 31340752
    [TBL] [Abstract][Full Text] [Related]  

  • 11. SpeciesRax: A Tool for Maximum Likelihood Species Tree Inference from Gene Family Trees under Duplication, Transfer, and Loss.
    Morel B; Schade P; Lutteropp S; Williams TA; Szöllősi GJ; Stamatakis A
    Mol Biol Evol; 2022 Feb; 39(2):. PubMed ID: 35021210
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Species Tree Inference Using a Mixture Model.
    Ullah I; Parviainen P; Lagergren J
    Mol Biol Evol; 2015 Sep; 32(9):2469-82. PubMed ID: 25963975
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Development and phylogenetic utilities of a new set of single-/low-copy nuclear genes in Senecioneae (Asteraceae), with new insights into the tribal position and the relationships within subtribe Tussilagininae.
    Ren C; Wang L; Nie ZL; Johnson G; Yang QE; Wen J
    Mol Phylogenet Evol; 2021 Sep; 162():107202. PubMed ID: 33992786
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae).
    Schmickl R; Liston A; Zeisek V; Oberlander K; Weitemier K; Straub SC; Cronn RC; Dreyer LL; Suda J
    Mol Ecol Resour; 2016 Sep; 16(5):1124-35. PubMed ID: 26577756
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Detecting phylogenetic breakpoints and discordance from genome-wide alignments for species tree reconstruction.
    Ané C
    Genome Biol Evol; 2011; 3():246-58. PubMed ID: 21362638
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Accounting for Uncertainty in Gene Tree Estimation: Summary-Coalescent Species Tree Inference in a Challenging Radiation of Australian Lizards.
    Blom MPK; Bragg JG; Potter S; Moritz C
    Syst Biol; 2017 May; 66(3):352-366. PubMed ID: 28039387
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Perils of paralogy: using HSP70 genes for inferring organismal phylogenies.
    Martin AP; Burg TM
    Syst Biol; 2002 Aug; 51(4):570-87. PubMed ID: 12228000
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Phylogenomic analyses reveal a deep history of hybridization and polyploidy in the Neotropical genus Lachemilla (Rosaceae).
    Morales-Briones DF; Liston A; Tank DC
    New Phytol; 2018 Jun; 218(4):1668-1684. PubMed ID: 29604235
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Exon probe sets and bioinformatics pipelines for all levels of fish phylogenomics.
    Hughes LC; Ortí G; Saad H; Li C; White WT; Baldwin CC; Crandall KA; Arcila D; Betancur-R R
    Mol Ecol Resour; 2021 Apr; 21(3):816-833. PubMed ID: 33084200
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Is the extremely rare Iberian endemic plant species Castrilanthemum debeauxii (Compositae, Anthemideae) a 'living fossil'? Evidence from a multi-locus species tree reconstruction.
    Tomasello S; Álvarez I; Vargas P; Oberprieler C
    Mol Phylogenet Evol; 2015 Jan; 82 Pt A():118-30. PubMed ID: 25281923
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.