These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
177 related articles for article (PubMed ID: 35799193)
41. High throughput screening identifies SOX2 as a super pioneer factor that inhibits DNA methylation maintenance at its binding sites. Vanzan L; Soldati H; Ythier V; Anand S; Braun SMG; Francis N; Murr R Nat Commun; 2021 Jun; 12(1):3337. PubMed ID: 34099689 [TBL] [Abstract][Full Text] [Related]
42. Pioneer transcription factors are associated with the modulation of DNA methylation patterns across cancers. Lemma RB; Fleischer T; Martinsen E; Ledsaak M; Kristensen V; Eskeland R; Gabrielsen OS; Mathelier A Epigenetics Chromatin; 2022 Apr; 15(1):13. PubMed ID: 35440061 [TBL] [Abstract][Full Text] [Related]
43. Understanding variation in transcription factor binding by modeling transcription factor genome-epigenome interactions. Chen CC; Xiao S; Xie D; Cao X; Song CX; Wang T; He C; Zhong S PLoS Comput Biol; 2013; 9(12):e1003367. PubMed ID: 24339764 [TBL] [Abstract][Full Text] [Related]
44. Predicting transcription factor site occupancy using DNA sequence intrinsic and cell-type specific chromatin features. Kumar S; Bucher P BMC Bioinformatics; 2016 Jan; 17 Suppl 1(Suppl 1):4. PubMed ID: 26818008 [TBL] [Abstract][Full Text] [Related]
45. Differential sensitivity of zinc finger transcription factors MTF-1, Sp1 and Krox-20 to CpG methylation of their binding sites. Radtke F; Hug M; Georgiev O; Matsuo K; Schaffner W Biol Chem Hoppe Seyler; 1996 Jan; 377(1):47-56. PubMed ID: 8929813 [TBL] [Abstract][Full Text] [Related]
49. Detection of transcription factors binding to methylated DNA by deep recurrent neural network. Li H; Gong Y; Liu Y; Lin H; Wang G Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34962264 [TBL] [Abstract][Full Text] [Related]
50. Cytosine methylation transforms an E2F site in the retinoblastoma gene promoter into a binding site for the general repressor methylcytosine-binding protein 2 (MeCP2). Di Fiore B; Palena A; Felsani A; Palitti F; Caruso M; Lavia P Nucleic Acids Res; 1999 Jul; 27(14):2852-9. PubMed ID: 10390525 [TBL] [Abstract][Full Text] [Related]
51. Cooperative binding of transcription factors in the human genome. Nie Y; Shu C; Sun X Genomics; 2020 Sep; 112(5):3427-3434. PubMed ID: 32574834 [TBL] [Abstract][Full Text] [Related]
52. Systematic prediction of DNA shape changes due to CpG methylation explains epigenetic effects on protein-DNA binding. Rao S; Chiu TP; Kribelbauer JF; Mann RS; Bussemaker HJ; Rohs R Epigenetics Chromatin; 2018 Feb; 11(1):6. PubMed ID: 29409522 [TBL] [Abstract][Full Text] [Related]
54. Modelling the evolution of transcription factor binding preferences in complex eukaryotes. Rosanova A; Colliva A; Osella M; Caselle M Sci Rep; 2017 Aug; 7(1):7596. PubMed ID: 28790414 [TBL] [Abstract][Full Text] [Related]
55. The influence of transcription factor competition on the relationship between occupancy and affinity. Zabet NR; Foy R; Adryan B PLoS One; 2013; 8(9):e73714. PubMed ID: 24086290 [TBL] [Abstract][Full Text] [Related]
56. High-resolution Nanopore methylome-maps reveal random hyper-methylation at CpG-poor regions as driver of chemoresistance in leukemias. Magi A; Mattei G; Mingrino A; Caprioli C; Ronchini C; Frigè G; Semeraro R; Bolognini D; Rambaldi A; Candoni A; Colombo E; Mazzarella L; Pelicci PG Commun Biol; 2023 Apr; 6(1):382. PubMed ID: 37031307 [TBL] [Abstract][Full Text] [Related]
57. Distinguishing direct versus indirect transcription factor-DNA interactions. Gordân R; Hartemink AJ; Bulyk ML Genome Res; 2009 Nov; 19(11):2090-100. PubMed ID: 19652015 [TBL] [Abstract][Full Text] [Related]
58. Contribution of Sequence Motif, Chromatin State, and DNA Structure Features to Predictive Models of Transcription Factor Binding in Yeast. Tsai ZT; Shiu SH; Tsai HK PLoS Comput Biol; 2015 Aug; 11(8):e1004418. PubMed ID: 26291518 [TBL] [Abstract][Full Text] [Related]
59. Computational identification of diverse mechanisms underlying transcription factor-DNA occupancy. Cheng Q; Kazemian M; Pham H; Blatti C; Celniker SE; Wolfe SA; Brodsky MH; Sinha S PLoS Genet; 2013; 9(8):e1003571. PubMed ID: 23935523 [TBL] [Abstract][Full Text] [Related]
60. Evidence that direct inhibition of transcription factor binding is the prevailing mode of gene and repeat repression by DNA methylation. Kaluscha S; Domcke S; Wirbelauer C; Stadler MB; Durdu S; Burger L; Schübeler D Nat Genet; 2022 Dec; 54(12):1895-1906. PubMed ID: 36471082 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]