312 related articles for article (PubMed ID: 35799218)
1. Phylogenies of the 16S rRNA gene and its hypervariable regions lack concordance with core genome phylogenies.
Hassler HB; Probert B; Moore C; Lawson E; Jackson RW; Russell BT; Richards VP
Microbiome; 2022 Jul; 10(1):104. PubMed ID: 35799218
[TBL] [Abstract][Full Text] [Related]
2. An accurate and efficient experimental approach for characterization of the complex oral microbiota.
Zheng W; Tsompana M; Ruscitto A; Sharma A; Genco R; Sun Y; Buck MJ
Microbiome; 2015 Oct; 3():48. PubMed ID: 26437933
[TBL] [Abstract][Full Text] [Related]
3. Microbial Diversity Biased Estimation Caused by Intragenomic Heterogeneity and Interspecific Conservation of 16S rRNA Genes.
Pan P; Gu Y; Sun DL; Wu QL; Zhou NY
Appl Environ Microbiol; 2023 May; 89(5):e0210822. PubMed ID: 37129483
[TBL] [Abstract][Full Text] [Related]
4. Determining the most accurate 16S rRNA hypervariable region for taxonomic identification from respiratory samples.
López-Aladid R; Fernández-Barat L; Alcaraz-Serrano V; Bueno-Freire L; Vázquez N; Pastor-Ibáñez R; Palomeque A; Oscanoa P; Torres A
Sci Rep; 2023 Mar; 13(1):3974. PubMed ID: 36894603
[TBL] [Abstract][Full Text] [Related]
5. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
[TBL] [Abstract][Full Text] [Related]
6. Comparison of different hypervariable regions of 16S rRNA for taxonomic profiling of vaginal microbiota using next-generation sequencing.
Sirichoat A; Sankuntaw N; Engchanil C; Buppasiri P; Faksri K; Namwat W; Chantratita W; Lulitanond V
Arch Microbiol; 2021 Apr; 203(3):1159-1166. PubMed ID: 33221964
[TBL] [Abstract][Full Text] [Related]
7. Optimisation of 16S rRNA gut microbiota profiling of extremely low birth weight infants.
Alcon-Giner C; Caim S; Mitra S; Ketskemety J; Wegmann U; Wain J; Belteki G; Clarke P; Hall LJ
BMC Genomics; 2017 Nov; 18(1):841. PubMed ID: 29096601
[TBL] [Abstract][Full Text] [Related]
8. Variable copy number, intra-genomic heterogeneities and lateral transfers of the 16S rRNA gene in Pseudomonas.
Bodilis J; Nsigue-Meilo S; Besaury L; Quillet L
PLoS One; 2012; 7(4):e35647. PubMed ID: 22545126
[TBL] [Abstract][Full Text] [Related]
9. Development of an Analysis Pipeline Characterizing Multiple Hypervariable Regions of 16S rRNA Using Mock Samples.
Barb JJ; Oler AJ; Kim HS; Chalmers N; Wallen GR; Cashion A; Munson PJ; Ames NJ
PLoS One; 2016; 11(2):e0148047. PubMed ID: 26829716
[TBL] [Abstract][Full Text] [Related]
10. Taxonomic precision of different hypervariable regions of 16S rRNA gene and annotation methods for functional bacterial groups in biological wastewater treatment.
Guo F; Ju F; Cai L; Zhang T
PLoS One; 2013; 8(10):e76185. PubMed ID: 24146837
[TBL] [Abstract][Full Text] [Related]
11. Primer Design for an Accurate View of Picocyanobacterial Community Structure by Using High-Throughput Sequencing.
Huber P; Cornejo-Castillo FM; Ferrera I; Sánchez P; Logares R; Metz S; Balagué V; Acinas SG; Gasol JM; Unrein F
Appl Environ Microbiol; 2019 Apr; 85(7):. PubMed ID: 30709827
[TBL] [Abstract][Full Text] [Related]
12. Discordant 16S and 23S rRNA gene phylogenies for the genus Helicobacter: implications for phylogenetic inference and systematics.
Dewhirst FE; Shen Z; Scimeca MS; Stokes LN; Boumenna T; Chen T; Paster BJ; Fox JG
J Bacteriol; 2005 Sep; 187(17):6106-18. PubMed ID: 16109952
[TBL] [Abstract][Full Text] [Related]
13. Construction & assessment of a unified curated reference database for improving the taxonomic classification of bacteria using 16S rRNA sequence data.
Agnihotry S; Sarangi AN; Aggarwal R
Indian J Med Res; 2020 Jan; 151(1):93-103. PubMed ID: 32134020
[TBL] [Abstract][Full Text] [Related]
14. Amplicon Sequence Variants Artificially Split Bacterial Genomes into Separate Clusters.
Schloss PD
mSphere; 2021 Aug; 6(4):e0019121. PubMed ID: 34287003
[TBL] [Abstract][Full Text] [Related]
15. Sensitivity and correlation of hypervariable regions in 16S rRNA genes in phylogenetic analysis.
Yang B; Wang Y; Qian PY
BMC Bioinformatics; 2016 Mar; 17():135. PubMed ID: 27000765
[TBL] [Abstract][Full Text] [Related]
16. Impact of Bead-Beating Intensity on the Genus- and Species-Level Characterization of the Gut Microbiome Using Amplicon and Complete 16S rRNA Gene Sequencing.
Zhang B; Brock M; Arana C; Dende C; van Oers NS; Hooper LV; Raj P
Front Cell Infect Microbiol; 2021; 11():678522. PubMed ID: 34660333
[TBL] [Abstract][Full Text] [Related]
17. Effect of Intragenomic Sequence Heterogeneity among Multiple 16S rRNA Genes on Species Identification of
Lin JN; Lai CH; Lin SY; Lee CC; Lee NY; Liu PY; Yang CH; Huang YH
Microbiol Spectr; 2022 Oct; 10(5):e0133822. PubMed ID: 36036645
[TBL] [Abstract][Full Text] [Related]
18. Metataxonomic insights in the distribution of Lactobacillaceae in foods and food environments.
Parente E; Zotta T; Giavalisco M; Ricciardi A
Int J Food Microbiol; 2023 Apr; 391-393():110124. PubMed ID: 36841075
[TBL] [Abstract][Full Text] [Related]
19. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing.
Ogier JC; Pagès S; Galan M; Barret M; Gaudriault S
BMC Microbiol; 2019 Jul; 19(1):171. PubMed ID: 31357928
[TBL] [Abstract][Full Text] [Related]
20. Comparative phylogenetic analyses of members of the order Planctomycetales and the division Verrucomicrobia: 23S rRNA gene sequence analysis supports the 16S rRNA gene sequence-derived phylogeny.
Ward NL; Rainey FA; Hedlund BP; Staley JT; Ludwig W; Stackebrandt E
Int J Syst Evol Microbiol; 2000 Nov; 50 Pt 6():1965-1972. PubMed ID: 11155969
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
