BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

198 related articles for article (PubMed ID: 35858915)

  • 1. An epigenome atlas of neural progenitors within the embryonic mouse forebrain.
    Rhodes CT; Thompson JJ; Mitra A; Asokumar D; Lee DR; Lee DJ; Zhang Y; Jason E; Dale RK; Rocha PP; Petros TJ
    Nat Commun; 2022 Jul; 13(1):4196. PubMed ID: 35858915
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Integrative analysis of reference epigenomes in 20 rice varieties.
    Zhao L; Xie L; Zhang Q; Ouyang W; Deng L; Guan P; Ma M; Li Y; Zhang Y; Xiao Q; Zhang J; Li H; Wang S; Man J; Cao Z; Zhang Q; Zhang Q; Li G; Li X
    Nat Commun; 2020 May; 11(1):2658. PubMed ID: 32461553
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity.
    Pancaldi V; Carrillo-de-Santa-Pau E; Javierre BM; Juan D; Fraser P; Spivakov M; Valencia A; Rico D
    Genome Biol; 2016 Jul; 17(1):152. PubMed ID: 27391817
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comprehensive epigenome characterization reveals diverse transcriptional regulation across human vascular endothelial cells.
    Nakato R; Wada Y; Nakaki R; Nagae G; Katou Y; Tsutsumi S; Nakajima N; Fukuhara H; Iguchi A; Kohro T; Kanki Y; Saito Y; Kobayashi M; Izumi-Taguchi A; Osato N; Tatsuno K; Kamio A; Hayashi-Takanaka Y; Wada H; Ohta S; Aikawa M; Nakajima H; Nakamura M; McGee RC; Heppner KW; Kawakatsu T; Genno M; Yanase H; Kume H; Senbonmatsu T; Homma Y; Nishimura S; Mitsuyama T; Aburatani H; Kimura H; Shirahige K
    Epigenetics Chromatin; 2019 Dec; 12(1):77. PubMed ID: 31856914
    [TBL] [Abstract][Full Text] [Related]  

  • 5. DNA methylation atlas of the mouse brain at single-cell resolution.
    Liu H; Zhou J; Tian W; Luo C; Bartlett A; Aldridge A; Lucero J; Osteen JK; Nery JR; Chen H; Rivkin A; Castanon RG; Clock B; Li YE; Hou X; Poirion OB; Preissl S; Pinto-Duarte A; O'Connor C; Boggeman L; Fitzpatrick C; Nunn M; Mukamel EA; Zhang Z; Callaway EM; Ren B; Dixon JR; Behrens MM; Ecker JR
    Nature; 2021 Oct; 598(7879):120-128. PubMed ID: 34616061
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Spatially resolved epigenomic profiling of single cells in complex tissues.
    Lu T; Ang CE; Zhuang X
    Cell; 2022 Nov; 185(23):4448-4464.e17. PubMed ID: 36272405
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Chromatin alterations during the epididymal maturation of mouse sperm refine the paternally inherited epigenome.
    Bedi YS; Roach AN; Thomas KN; Mehta NA; Golding MC
    Epigenetics Chromatin; 2022 Jan; 15(1):2. PubMed ID: 34991687
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Decoding the universal human chromatin landscape through teratoma-based profiling.
    Kidder BL
    Nucleic Acids Res; 2024 Apr; 52(7):3589-3606. PubMed ID: 38281248
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Dissecting the Epigenome Driving Drug Resistance by ATAC-Seq.
    de Nicola F; Corleone G; Goeman F
    Methods Mol Biol; 2022; 2535():171-185. PubMed ID: 35867231
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts.
    Ay F; Bailey TL; Noble WS
    Genome Res; 2014 Jun; 24(6):999-1011. PubMed ID: 24501021
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Integrative pan cancer analysis reveals epigenomic variation in cancer type and cell specific chromatin domains.
    Gopi LK; Kidder BL
    Nat Commun; 2021 Mar; 12(1):1419. PubMed ID: 33658503
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PI3K signaling specifies proximal-distal fate by driving a developmental gene regulatory network in SOX9+ mouse lung progenitors.
    Khattar D; Fernandes S; Snowball J; Guo M; Gillen MC; Jain SS; Sinner D; Zacharias W; Swarr DT
    Elife; 2022 Aug; 11():. PubMed ID: 35976093
    [TBL] [Abstract][Full Text] [Related]  

  • 13. In vivo tissue-specific chromatin profiling in Drosophila melanogaster using GFP-tagged nuclei.
    Jauregui-Lozano J; Bakhle K; Weake VM
    Genetics; 2021 Jul; 218(3):. PubMed ID: 34022041
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Nuclei Isolation from Mouse Cardiac Progenitor Cells for Epigenome and Gene Expression Profiling at Single-Cell Resolution.
    Ibrahim S; Robert C; Humbert C; Ferreira C; Collod G; Stefanovic S
    J Vis Exp; 2023 May; (195):. PubMed ID: 37246858
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MESIA: multi-epigenome sample integration approach for precise peak calling.
    Park SG; Kim WJ; Moon JI; Kim KT; Ryoo HM
    Sci Rep; 2023 Nov; 13(1):20859. PubMed ID: 38012291
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Epigenomic landscape study reveals molecular subtypes and EBV-associated regulatory epigenome reprogramming in nasopharyngeal carcinoma.
    Ka-Yue Chow L; Lai-Shun Chung D; Tao L; Chan KF; Tung SY; Cheong Ngan RK; Ng WT; Wing-Mui Lee A; Yau CC; Lai-Wan Kwong D; Ho-Fun Lee V; Lam KO; Liu J; Chen H; Dai W; Lung ML
    EBioMedicine; 2022 Dec; 86():104357. PubMed ID: 36371985
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Epigenome overlap measure (EPOM) for comparing tissue/cell types based on chromatin states.
    Li WV; Razaee ZS; Li JJ
    BMC Genomics; 2016 Jan; 17 Suppl 1(Suppl 1):10. PubMed ID: 26817822
    [TBL] [Abstract][Full Text] [Related]  

  • 18. ChIATAC is an efficient strategy for multi-omics mapping of 3D epigenomes from low-cell inputs.
    Chai H; Tjong H; Li P; Liao W; Wang P; Wong CH; Ngan CY; Leonard WJ; Wei CL; Ruan Y
    Nat Commun; 2023 Jan; 14(1):213. PubMed ID: 36639381
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation.
    Preissl S; Fang R; Huang H; Zhao Y; Raviram R; Gorkin DU; Zhang Y; Sos BC; Afzal V; Dickel DE; Kuan S; Visel A; Pennacchio LA; Zhang K; Ren B
    Nat Neurosci; 2018 Mar; 21(3):432-439. PubMed ID: 29434377
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Landscape of monoallelic DNA accessibility in mouse embryonic stem cells and neural progenitor cells.
    Xu J; Carter AC; Gendrel AV; Attia M; Loftus J; Greenleaf WJ; Tibshirani R; Heard E; Chang HY
    Nat Genet; 2017 Mar; 49(3):377-386. PubMed ID: 28112738
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.