114 related articles for article (PubMed ID: 35876431)
1. Selectivity and efficiency in the ligation of the pyrene:abasic base pair by T4 and PBCV-1 DNA ligases.
Park H; Gibbs JM
Chem Commun (Camb); 2022 Aug; 58(65):9072-9075. PubMed ID: 35876431
[TBL] [Abstract][Full Text] [Related]
2. Cognate base-pair selectivity of hydrophobic unnatural bases in DNA ligation by T4 DNA ligase.
Kimoto M; Soh SHG; Tan HP; Okamoto I; Hirao I
Biopolymers; 2021 Jan; 112(1):e23407. PubMed ID: 33156531
[TBL] [Abstract][Full Text] [Related]
3. Enhanced mismatch selectivity of T4 DNA ligase far above the probe: Target duplex dissociation temperature.
Osman EA; Alladin-Mustan BS; Hales SC; Matharu GK; Gibbs JM
Biopolymers; 2021 Jan; 112(1):e23393. PubMed ID: 32896905
[TBL] [Abstract][Full Text] [Related]
4. Effects of 2'-O-methyl nucleotide on ligation capability of T4 DNA ligase.
Zhao B; Tong Z; Zhao G; Mu R; Shang H; Guan Y
Acta Biochim Biophys Sin (Shanghai); 2014 Sep; 46(9):727-37. PubMed ID: 25022752
[TBL] [Abstract][Full Text] [Related]
5. Chimeric padlock and iLock probes for increased efficiency of targeted RNA detection.
Krzywkowski T; Kühnemund M; Nilsson M
RNA; 2019 Jan; 25(1):82-89. PubMed ID: 30309880
[TBL] [Abstract][Full Text] [Related]
6. Fidelity of RNA templated end-joining by chlorella virus DNA ligase and a novel iLock assay with improved direct RNA detection accuracy.
Krzywkowski T; Nilsson M
Nucleic Acids Res; 2017 Oct; 45(18):e161. PubMed ID: 29048593
[TBL] [Abstract][Full Text] [Related]
7. Role of base stacking and sequence context in the inhibition of yeast DNA polymerase eta by pyrene nucleotide.
Hwang H; Taylor JS
Biochemistry; 2004 Nov; 43(46):14612-23. PubMed ID: 15544332
[TBL] [Abstract][Full Text] [Related]
8. Integrity of duplex structures without hydrogen bonding: DNA with pyrene paired at abasic sites.
Smirnov S; Matray TJ; Kool ET; de los Santos C
Nucleic Acids Res; 2002 Dec; 30(24):5561-9. PubMed ID: 12490724
[TBL] [Abstract][Full Text] [Related]
9. DNA ligases ensure fidelity by interrogating minor groove contacts.
Liu P; Burdzy A; Sowers LC
Nucleic Acids Res; 2004; 32(15):4503-11. PubMed ID: 15328364
[TBL] [Abstract][Full Text] [Related]
10. Evidence for Watson-Crick and not Hoogsteen or wobble base pairing in the selection of nucleotides for insertion opposite pyrimidines and a thymine dimer by yeast DNA pol eta.
Hwang H; Taylor JS
Biochemistry; 2005 Mar; 44(12):4850-60. PubMed ID: 15779911
[TBL] [Abstract][Full Text] [Related]
11. Specificity and fidelity of strand joining by Chlorella virus DNA ligase.
Sriskanda V; Shuman S
Nucleic Acids Res; 1998 Aug; 26(15):3536-41. PubMed ID: 9671815
[TBL] [Abstract][Full Text] [Related]
12. Nucleotide misincorporation, 3'-mismatch extension, and responses to abasic sites and DNA adducts by the polymerase component of bacterial DNA ligase D.
Yakovleva L; Shuman S
J Biol Chem; 2006 Sep; 281(35):25026-40. PubMed ID: 16816388
[TBL] [Abstract][Full Text] [Related]
13. Making AppDNA using T4 DNA ligase.
Chiuman W; Li Y
Bioorg Chem; 2002 Oct; 30(5):332-49. PubMed ID: 12485593
[TBL] [Abstract][Full Text] [Related]
14. Efficient DNA ligation in DNA-RNA hybrid helices by Chlorella virus DNA ligase.
Lohman GJ; Zhang Y; Zhelkovsky AM; Cantor EJ; Evans TC
Nucleic Acids Res; 2014 Feb; 42(3):1831-44. PubMed ID: 24203707
[TBL] [Abstract][Full Text] [Related]
15. A specific partner for abasic damage in DNA.
Matray TJ; Kool ET
Nature; 1999 Jun; 399(6737):704-8. PubMed ID: 10385125
[TBL] [Abstract][Full Text] [Related]
16. The action of DNA ligase at abasic sites in DNA.
Bogenhagen DF; Pinz KG
J Biol Chem; 1998 Apr; 273(14):7888-93. PubMed ID: 9525883
[TBL] [Abstract][Full Text] [Related]
17. Efficient in situ detection of mRNAs using the Chlorella virus DNA ligase for padlock probe ligation.
Schneider N; Meier M
RNA; 2017 Feb; 23(2):250-256. PubMed ID: 27879431
[TBL] [Abstract][Full Text] [Related]
18. Nicks 3' or 5' to AP sites or to mispaired bases, and one-nucleotide gaps can be sealed by T4 DNA ligase.
Goffin C; Bailly V; Verly WG
Nucleic Acids Res; 1987 Nov; 15(21):8755-71. PubMed ID: 3684572
[TBL] [Abstract][Full Text] [Related]
19. Quick Click: The DNA-Templated Ligation of 3'-O-Propargyl- and 5'-Azide-Modified Strands Is as Rapid as and More Selective than Ligase.
Osman EA; Gadzikwa T; Gibbs JM
Chembiochem; 2018 Oct; 19(19):2081-2087. PubMed ID: 30059599
[TBL] [Abstract][Full Text] [Related]
20. 3' Branch ligation: a novel method to ligate non-complementary DNA to recessed or internal 3'OH ends in DNA or RNA.
Wang L; Xi Y; Zhang W; Wang W; Shen H; Wang X; Zhao X; Alexeev A; Peters BA; Albert A; Xu X; Ren H; Wang O; Kirkconnell K; Perazich H; Clark S; Hurowitz E; Chen A; Xu X; Drmanac R; Jiang Y
DNA Res; 2019 Feb; 26(1):45-53. PubMed ID: 30428014
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
