These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

187 related articles for article (PubMed ID: 35906527)

  • 1. Conserved histidine and tyrosine determine spectral responses through the water network in Deinococcus radiodurans phytochrome.
    Lehtivuori H; Rumfeldt J; Mustalahti S; Kurkinen S; Takala H
    Photochem Photobiol Sci; 2022 Nov; 21(11):1975-1989. PubMed ID: 35906527
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Coordination of the biliverdin D-ring in bacteriophytochromes.
    Lenngren N; Edlund P; Takala H; Stucki-Buchli B; Rumfeldt J; Peshev I; Häkkänen H; Westenhoff S; Ihalainen JA
    Phys Chem Chem Phys; 2018 Jul; 20(27):18216-18225. PubMed ID: 29938729
    [TBL] [Abstract][Full Text] [Related]  

  • 3. On the (un)coupling of the chromophore, tongue interactions, and overall conformation in a bacterial phytochrome.
    Takala H; Lehtivuori HK; Berntsson O; Hughes A; Nanekar R; Niebling S; Panman M; Henry L; Menzel A; Westenhoff S; Ihalainen JA
    J Biol Chem; 2018 May; 293(21):8161-8172. PubMed ID: 29622676
    [TBL] [Abstract][Full Text] [Related]  

  • 4. UV-Vis Spectroscopy Reveals a Correlation Between Y263 and BV Protonation States in Bacteriophytochromes.
    Rumfeldt JA; Takala H; Liukkonen A; Ihalainen JA
    Photochem Photobiol; 2019 Jul; 95(4):969-979. PubMed ID: 30843203
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Crystallographic and electron microscopic analyses of a bacterial phytochrome reveal local and global rearrangements during photoconversion.
    Burgie ES; Wang T; Bussell AN; Walker JM; Li H; Vierstra RD
    J Biol Chem; 2014 Aug; 289(35):24573-87. PubMed ID: 25006244
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The interconnecting hairpin extension "arm": An essential allosteric element of phytochrome activity.
    Kurttila M; Rumfeldt J; Takala H; Ihalainen JA
    Structure; 2023 Sep; 31(9):1100-1108.e4. PubMed ID: 37392739
    [TBL] [Abstract][Full Text] [Related]  

  • 7. X-ray radiation induces deprotonation of the bilin chromophore in crystalline D. radiodurans phytochrome.
    Li F; Burgie ES; Yu T; Héroux A; Schatz GC; Vierstra RD; Orville AM
    J Am Chem Soc; 2015 Mar; 137(8):2792-5. PubMed ID: 25650486
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The primary structural photoresponse of phytochrome proteins captured by a femtosecond X-ray laser.
    Claesson E; Wahlgren WY; Takala H; Pandey S; Castillon L; Kuznetsova V; Henry L; Panman M; Carrillo M; Kübel J; Nanekar R; Isaksson L; Nimmrich A; Cellini A; Morozov D; Maj M; Kurttila M; Bosman R; Nango E; Tanaka R; Tanaka T; Fangjia L; Iwata S; Owada S; Moffat K; Groenhof G; Stojković EA; Ihalainen JA; Schmidt M; Westenhoff S
    Elife; 2020 Mar; 9():. PubMed ID: 32228856
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Mutational analysis of Deinococcus radiodurans bacteriophytochrome reveals key amino acids necessary for the photochromicity and proton exchange cycle of phytochromes.
    Wagner JR; Zhang J; von Stetten D; Günther M; Murgida DH; Mroginski MA; Walker JM; Forest KT; Hildebrandt P; Vierstra RD
    J Biol Chem; 2008 May; 283(18):12212-26. PubMed ID: 18192276
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Protonation of the Biliverdin IXα Chromophore in the Red and Far-Red Photoactive States of a Bacteriophytochrome.
    Modi V; Donnini S; Groenhof G; Morozov D
    J Phys Chem B; 2019 Mar; 123(10):2325-2334. PubMed ID: 30762368
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome.
    Wagner JR; Brunzelle JS; Forest KT; Vierstra RD
    Nature; 2005 Nov; 438(7066):325-31. PubMed ID: 16292304
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Fully Quantum Chemical Treatment of Chromophore-Protein Interactions in Phytochromes.
    González R; Mroginski MA
    J Phys Chem B; 2019 Nov; 123(46):9819-9830. PubMed ID: 31674186
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structure-guided engineering enhances a phytochrome-based infrared fluorescent protein.
    Auldridge ME; Satyshur KA; Anstrom DM; Forest KT
    J Biol Chem; 2012 Mar; 287(10):7000-9. PubMed ID: 22210774
    [TBL] [Abstract][Full Text] [Related]  

  • 14. High resolution structure of Deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution.
    Wagner JR; Zhang J; Brunzelle JS; Vierstra RD; Forest KT
    J Biol Chem; 2007 Apr; 282(16):12298-309. PubMed ID: 17322301
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Transient IR spectroscopy identifies key interactions and unravels new intermediates in the photocycle of a bacterial phytochrome.
    Kübel J; Chenchiliyan M; Ooi SA; Gustavsson E; Isaksson L; Kuznetsova V; Ihalainen JA; Westenhoff S; Maj M
    Phys Chem Chem Phys; 2020 May; 22(17):9195-9203. PubMed ID: 32149285
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The hairpin extension controls solvent access to the chromophore binding pocket in a bacterial phytochrome: a UV-vis absorption spectroscopy study.
    Rumfeldt J; Kurttila M; Takala H; Ihalainen JA
    Photochem Photobiol Sci; 2021 Sep; 20(9):1173-1181. PubMed ID: 34460093
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Connection between absorption properties and conformational changes in Deinococcus radiodurans phytochrome.
    Takala H; Lehtivuori H; Hammarén H; Hytönen VP; Ihalainen JA
    Biochemistry; 2014 Nov; 53(45):7076-85. PubMed ID: 25337904
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Signal amplification and transduction in phytochrome photosensors.
    Takala H; Björling A; Berntsson O; Lehtivuori H; Niebling S; Hoernke M; Kosheleva I; Henning R; Menzel A; Ihalainen JA; Westenhoff S
    Nature; 2014 May; 509(7499):245-248. PubMed ID: 24776794
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The structural effect between the output module and chromophore-binding domain is a two-way street via the hairpin extension.
    Kurttila M; Etzl S; Rumfeldt J; Takala H; Galler N; Winkler A; Ihalainen JA
    Photochem Photobiol Sci; 2022 Nov; 21(11):1881-1894. PubMed ID: 35984631
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The biliverdin chromophore binds covalently to a conserved cysteine residue in the N-terminus of Agrobacterium phytochrome Agp1.
    Lamparter T; Carrascal M; Michael N; Martinez E; Rottwinkel G; Abian J
    Biochemistry; 2004 Mar; 43(12):3659-69. PubMed ID: 15035636
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.