These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

120 related articles for article (PubMed ID: 35910628)

  • 1. The efficiency of Nextera XT tagmentation depends on G and C bases in the binding motif leading to uneven coverage in bacterial species with low and neutral GC-content.
    Segerman B; Ástvaldsson Á; Mustafa L; Skarin J; Skarin H
    Front Microbiol; 2022; 13():944770. PubMed ID: 35910628
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Evaluating coverage bias in next-generation sequencing of Escherichia coli.
    Gunasekera S; Abraham S; Stegger M; Pang S; Wang P; Sahibzada S; O'Dea M
    PLoS One; 2021; 16(6):e0253440. PubMed ID: 34166413
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Sequencing of Enteric Bacteria: Library Preparation Procedure Matters for Accurate Identification and Characterization.
    Poates A; Truong J; Lindsey R; Griswold T; Williams-Newkirk AJ; Carleton H; Trees E
    Foodborne Pathog Dis; 2022 Aug; 19(8):569-578. PubMed ID: 35861967
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Hackflex: low-cost, high-throughput, Illumina Nextera Flex library construction.
    Gaio D; Anantanawat K; To J; Liu M; Monahan L; Darling AE
    Microb Genom; 2022 Jan; 8(1):. PubMed ID: 35014949
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evaluation of Rapid Library Preparation Protocols for Whole Genome Sequencing Based Outbreak Investigation.
    Seth-Smith HMB; Bonfiglio F; Cuénod A; Reist J; Egli A; Wüthrich D
    Front Public Health; 2019; 7():241. PubMed ID: 31508405
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparison of the sequencing bias of currently available library preparation kits for Illumina sequencing of bacterial genomes and metagenomes.
    Sato MP; Ogura Y; Nakamura K; Nishida R; Gotoh Y; Hayashi M; Hisatsune J; Sugai M; Takehiko I; Hayashi T
    DNA Res; 2019 Oct; 26(5):391-398. PubMed ID: 31364694
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparison of Sample Preparation Methods Used for the Next-Generation Sequencing of Mycobacterium tuberculosis.
    Tyler AD; Christianson S; Knox NC; Mabon P; Wolfe J; Van Domselaar G; Graham MR; Sharma MK
    PLoS One; 2016; 11(2):e0148676. PubMed ID: 26849565
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Multi-laboratory evaluation of the Illumina iSeq platform for whole genome sequencing of
    Mitchell PK; Wang L; Stanhope BJ; Cronk BD; Anderson R; Mohan S; Zhou L; Sanchez S; Bartlett P; Maddox C; DeShambo V; Mani R; Hengesbach LM; Gresch S; Wright K; Mor S; Zhang S; Shen Z; Yan L; Mackey R; Franklin-Guild R; Zhang Y; Prarat M; Shiplett K; Ramachandran A; Narayanan S; Sanders J; Hunkapiller AA; Lahmers K; Carbonello AA; Aulik N; Lim A; Cooper J; Jones A; Guag J; Nemser SM; Tyson GH; Timme R; Strain E; Reimschuessel R; Ceric O; Goodman LB
    Microb Genom; 2022 Feb; 8(2):. PubMed ID: 35113783
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Evaluation of a transposase protocol for rapid generation of shotgun high-throughput sequencing libraries from nanogram quantities of DNA.
    Marine R; Polson SW; Ravel J; Hatfull G; Russell D; Sullivan M; Syed F; Dumas M; Wommack KE
    Appl Environ Microbiol; 2011 Nov; 77(22):8071-9. PubMed ID: 21948828
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A performance evaluation of Nextera XT and KAPA HyperPlus for rapid Illumina library preparation of long-range mitogenome amplicons.
    Ring JD; Sturk-Andreaggi K; Peck MA; Marshall C
    Forensic Sci Int Genet; 2017 Jul; 29():174-180. PubMed ID: 28448897
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Small-Scale Illumina Library Preparation Using the Illumina Nextera XT DNA Library Preparation Kit.
    Zeden MS; Gründling A
    Cold Spring Harb Protoc; 2023 Apr; ():. PubMed ID: 37117015
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Impact of three Illumina library construction methods on GC bias and HLA genotype calling.
    Lan JH; Yin Y; Reed EF; Moua K; Thomas K; Zhang Q
    Hum Immunol; 2015 Mar; 76(2-3):166-75. PubMed ID: 25543015
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Exact mapping of Illumina blind spots in the
    Modlin SJ; Robinhold C; Morrissey C; Mitchell SN; Ramirez-Busby SM; Shmaya T; Valafar F
    Microb Genom; 2021 Mar; 7(3):. PubMed ID: 33502304
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Optimization of enzymatic fragmentation is crucial to maximize genome coverage: a comparison of library preparation methods for Illumina sequencing.
    Ribarska T; Bjørnstad PM; Sundaram AYM; Gilfillan GD
    BMC Genomics; 2022 Feb; 23(1):92. PubMed ID: 35105301
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Choice of library preparation affects sequence quality, genome assembly, and precise in silico prediction of virulence genes in shiga toxin-producing Escherichia coli.
    Haendiges J; Jinneman K; Gonzalez-Escalona N
    PLoS One; 2021; 16(3):e0242294. PubMed ID: 33761524
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Choosing a benchtop sequencing machine to characterise Helicobacter pylori genomes.
    Perkins TT; Tay CY; Thirriot F; Marshall B
    PLoS One; 2013; 8(6):e67539. PubMed ID: 23840736
    [TBL] [Abstract][Full Text] [Related]  

  • 17. GC Content-Associated Sequencing Bias Caused by Library Preparation Method May Infrequently Affect
    Li S; Zhang S; Deng X
    Appl Environ Microbiol; 2020 Sep; 86(18):. PubMed ID: 32680856
    [No Abstract]   [Full Text] [Related]  

  • 18. Use of WGS in Mycobacterium tuberculosis routine diagnosis.
    Cirillo DM; Cabibbe AM; De Filippo MR; Trovato A; Simonetti T; Rossolini GM; Tortoli E
    Int J Mycobacteriol; 2016 Dec; 5 Suppl 1():S252-S253. PubMed ID: 28043590
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Optimized Illumina PCR-free library preparation for bacterial whole genome sequencing and analysis of factors influencing de novo assembly.
    Huptas C; Scherer S; Wenning M
    BMC Res Notes; 2016 May; 9():269. PubMed ID: 27176120
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.
    Oyola SO; Otto TD; Gu Y; Maslen G; Manske M; Campino S; Turner DJ; Macinnis B; Kwiatkowski DP; Swerdlow HP; Quail MA
    BMC Genomics; 2012 Jan; 13():1. PubMed ID: 22214261
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.