121 related articles for article (PubMed ID: 35932730)
1. Discovering driver nodes in chronic kidney disease-related networks using Trader as a newly developed algorithm.
Masoudi-Sobhanzadeh Y; Gholaminejad A; Gheisari Y; Roointan A
Comput Biol Med; 2022 Sep; 148():105892. PubMed ID: 35932730
[TBL] [Abstract][Full Text] [Related]
2. A novel algorithm for finding optimal driver nodes to target control complex networks and its applications for drug targets identification.
Guo WF; Zhang SW; Shi QQ; Zhang CM; Zeng T; Chen L
BMC Genomics; 2018 Jan; 19(Suppl 1):924. PubMed ID: 29363426
[TBL] [Abstract][Full Text] [Related]
3. A novel subgradient-based optimization algorithm for blockmodel functional module identification.
Wang Y; Qian X
BMC Bioinformatics; 2013; 14 Suppl 2(Suppl 2):S23. PubMed ID: 23368964
[TBL] [Abstract][Full Text] [Related]
4. Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods.
Dimitrakopoulos C; Theofilatos K; Pegkas A; Likothanassis S; Mavroudi S
Artif Intell Med; 2016 Jul; 71():62-9. PubMed ID: 27506132
[TBL] [Abstract][Full Text] [Related]
5. Determining minimum set of driver nodes in protein-protein interaction networks.
Zhang XF; Ou-Yang L; Zhu Y; Wu MY; Dai DQ
BMC Bioinformatics; 2015 May; 16():146. PubMed ID: 25947063
[TBL] [Abstract][Full Text] [Related]
6. Controlling Directed Protein Interaction Networks in Cancer.
Kanhaiya K; Czeizler E; Gratie C; Petre I
Sci Rep; 2017 Sep; 7(1):10327. PubMed ID: 28871116
[TBL] [Abstract][Full Text] [Related]
7. SAlign-a structure aware method for global PPI network alignment.
Ayub U; Haider I; Naveed H
BMC Bioinformatics; 2020 Nov; 21(1):500. PubMed ID: 33148180
[TBL] [Abstract][Full Text] [Related]
8. Altering Indispensable Proteins in Controlling Directed Human Protein Interaction Network.
Zhang X
IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(6):2074-2078. PubMed ID: 29994604
[TBL] [Abstract][Full Text] [Related]
9. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
Alkan F; Erten C
Bioinformatics; 2015 Jul; 31(14):2356-63. PubMed ID: 25788620
[TBL] [Abstract][Full Text] [Related]
10. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
He J; Li C; Ye B; Zhong W
BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
[TBL] [Abstract][Full Text] [Related]
11. From communities to protein complexes: A local community detection algorithm on PPI networks.
Dilmaghani S; Brust MR; Ribeiro CHC; Kieffer E; Danoy G; Bouvry P
PLoS One; 2022; 17(1):e0260484. PubMed ID: 35085263
[TBL] [Abstract][Full Text] [Related]
12. Comparative analysis of housekeeping and tissue-specific driver nodes in human protein interaction networks.
Zhang XF; Ou-Yang L; Dai DQ; Wu MY; Zhu Y; Yan H
BMC Bioinformatics; 2016 Sep; 17(1):358. PubMed ID: 27612563
[TBL] [Abstract][Full Text] [Related]
13. Effective comparative analysis of protein-protein interaction networks by measuring the steady-state network flow using a Markov model.
Jeong H; Qian X; Yoon BJ
BMC Bioinformatics; 2016 Oct; 17(Suppl 13):395. PubMed ID: 27766938
[TBL] [Abstract][Full Text] [Related]
14. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
Ou-Yang L; Yan H; Zhang XF
BMC Bioinformatics; 2017 Dec; 18(Suppl 13):463. PubMed ID: 29219066
[TBL] [Abstract][Full Text] [Related]
15. Trader as a new optimization algorithm predicts drug-target interactions efficiently.
Masoudi-Sobhanzadeh Y; Omidi Y; Amanlou M; Masoudi-Nejad A
Sci Rep; 2019 Jun; 9(1):9348. PubMed ID: 31249365
[TBL] [Abstract][Full Text] [Related]
16. ClusterM: a scalable algorithm for computational prediction of conserved protein complexes across multiple protein interaction networks.
Wang Y; Jeong H; Yoon BJ; Qian X
BMC Genomics; 2020 Nov; 21(Suppl 10):615. PubMed ID: 33208103
[TBL] [Abstract][Full Text] [Related]
17. Incorporating topological information for predicting robust cancer subnetwork markers in human protein-protein interaction network.
Khunlertgit N; Yoon BJ
BMC Bioinformatics; 2016 Oct; 17(Suppl 13):351. PubMed ID: 27766944
[TBL] [Abstract][Full Text] [Related]
18. Identifying essential proteins from protein-protein interaction networks based on influence maximization.
Xu W; Dong Y; Guan J; Zhou S
BMC Bioinformatics; 2022 Aug; 23(Suppl 8):339. PubMed ID: 35974329
[TBL] [Abstract][Full Text] [Related]
19. C-element: a new clustering algorithm to find high quality functional modules in PPI networks.
Ghasemi M; Rahgozar M; Bidkhori G; Masoudi-Nejad A
PLoS One; 2013; 8(9):e72366. PubMed ID: 24039752
[TBL] [Abstract][Full Text] [Related]
20. MPGM: Scalable and Accurate Multiple Network Alignment.
Kazemi E; Grossglauser M
IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(6):2040-2052. PubMed ID: 31056510
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
