120 related articles for article (PubMed ID: 35939531)
1. G-Tetrad-Selective Ligand Binding Kinetics in G-Quadruplex DNA Probed with Fluorescence Correlation Spectroscopy.
Clovis NS; Sen S
J Phys Chem B; 2022 Aug; 126(32):6007-6015. PubMed ID: 35939531
[TBL] [Abstract][Full Text] [Related]
2. Dispersed dynamics of solvation in G-quadruplex DNA: comparison of dynamic Stokes shifts of probes in parallel and antiparallel quadruplex structures.
Singh MK; Shweta H; Sen S
Methods Appl Fluoresc; 2016 Sep; 4(3):034009. PubMed ID: 28355155
[TBL] [Abstract][Full Text] [Related]
3. Molecular Picture of the Effect of Cosolvent Crowding on Ligand Binding and Dispersed Solvation Dynamics in G-Quadruplex DNA.
Yadav K; Sardana D; Shweta H; Clovis NS; Sen S
J Phys Chem B; 2022 Mar; 126(8):1668-1681. PubMed ID: 35170968
[TBL] [Abstract][Full Text] [Related]
4. Power-Law Solvation Dynamics in G-Quadruplex DNA: Role of Hydration Dynamics on Ligand Solvation inside DNA.
Pal N; Shweta H; Singh MK; Verma SD; Sen S
J Phys Chem Lett; 2015 May; 6(9):1754-60. PubMed ID: 26263345
[TBL] [Abstract][Full Text] [Related]
5. Understanding ligand interaction with different structures of G-quadruplex DNA: evidence of kinetically controlled ligand binding and binding-mode assisted quadruplex structure alteration.
Verma SD; Pal N; Singh MK; Shweta H; Khan MF; Sen S
Anal Chem; 2012 Aug; 84(16):7218-26. PubMed ID: 22816788
[TBL] [Abstract][Full Text] [Related]
6. Probing the Binding Pathway of BRACO19 to a Parallel-Stranded Human Telomeric G-Quadruplex Using Molecular Dynamics Binding Simulation with AMBER DNA OL15 and Ligand GAFF2 Force Fields.
Machireddy B; Kalra G; Jonnalagadda S; Ramanujachary K; Wu C
J Chem Inf Model; 2017 Nov; 57(11):2846-2864. PubMed ID: 29028340
[TBL] [Abstract][Full Text] [Related]
7. G-quadruplex ligands exhibit differential G-tetrad selectivity.
Le DD; Di Antonio M; Chan LK; Balasubramanian S
Chem Commun (Camb); 2015 May; 51(38):8048-50. PubMed ID: 25864836
[TBL] [Abstract][Full Text] [Related]
8. Binding of Telomestatin, TMPyP4, BSU6037, and BRACO19 to a Telomeric G-Quadruplex-Duplex Hybrid Probed by All-Atom Molecular Dynamics Simulations with Explicit Solvent.
Sullivan HJ; Readmond C; Radicella C; Persad V; Fasano TJ; Wu C
ACS Omega; 2018 Nov; 3(11):14788-14806. PubMed ID: 30555989
[TBL] [Abstract][Full Text] [Related]
9. Structural insights into the anti-cancer activity of quercetin on G-tetrad, mixed G-tetrad, and G-quadruplex DNA using quantum chemical and molecular dynamics simulations.
Vinnarasi S; Radhika R; Vijayakumar S; Shankar R
J Biomol Struct Dyn; 2020 Feb; 38(2):317-339. PubMed ID: 30794082
[TBL] [Abstract][Full Text] [Related]
10. Mechanistic Insights into the Ligand-Induced Unfolding of an RNA G-Quadruplex.
Haldar S; Zhang Y; Xia Y; Islam B; Liu S; Gervasio FL; Mulholland AJ; Waller ZAE; Wei D; Haider S
J Am Chem Soc; 2022 Jan; 144(2):935-950. PubMed ID: 34989224
[TBL] [Abstract][Full Text] [Related]
11. Novel G-quadruplex stabilizing agents: in-silico approach and dynamics.
Kar RK; Suryadevara P; Jana J; Bhunia A; Chatterjee S
J Biomol Struct Dyn; 2013 Dec; 31(12):1497-518. PubMed ID: 23244447
[TBL] [Abstract][Full Text] [Related]
12. Ligand 5,10,15,20-tetra(N-methyl-4-pyridyl)porphine (TMPyP4) prefers the parallel propeller-type human telomeric G-quadruplex DNA over its other polymorphs.
Ali A; Bansal M; Bhattacharya S
J Phys Chem B; 2015 Jan; 119(1):5-14. PubMed ID: 25526532
[TBL] [Abstract][Full Text] [Related]
13. Insulin-like growth factor type I selectively binds to G-quadruplex structures.
Chen H; Sun H; Chai Y; Zhang S; Guan A; Li Q; Yao L; Tang Y
Biochim Biophys Acta Gen Subj; 2019 Jan; 1863(1):31-38. PubMed ID: 30278241
[TBL] [Abstract][Full Text] [Related]
14. Effect of loop orientation on quadruplex-TMPyP4 interaction.
Arora A; Maiti S
J Phys Chem B; 2008 Jul; 112(27):8151-9. PubMed ID: 18553964
[TBL] [Abstract][Full Text] [Related]
15. Calorimetric and spectroscopic investigations of the binding of metallated porphyrins to G-quadruplex DNA.
DuPont JI; Henderson KL; Metz A; Le VH; Emerson JP; Lewis EA
Biochim Biophys Acta; 2016 May; 1860(5):902-909. PubMed ID: 26363462
[TBL] [Abstract][Full Text] [Related]
16. Polycyclic azoniahetarenes: assessing the binding parameters of complexes between unsubstituted ligands and G-quadruplex DNA.
Jäger K; Bats JW; Ihmels H; Granzhan A; Uebach S; Patrick BO
Chemistry; 2012 Aug; 18(35):10903-15. PubMed ID: 22807262
[TBL] [Abstract][Full Text] [Related]
17. Molecular encapsulation of berberine by a modified β-cyclodextrin and binding of host: guest complex to G-quadruplex DNA.
Suganthi S; Sivaraj R; Enoch IVMV
Nucleosides Nucleotides Nucleic Acids; 2019; 38(11):858-873. PubMed ID: 31148522
[TBL] [Abstract][Full Text] [Related]
18. New insights into the structures of ligand-quadruplex complexes from molecular dynamics simulations.
Hou JQ; Chen SB; Tan JH; Ou TM; Luo HB; Li D; Xu J; Gu LQ; Huang ZS
J Phys Chem B; 2010 Nov; 114(46):15301-10. PubMed ID: 21049896
[TBL] [Abstract][Full Text] [Related]
19. Stabilization of guanine quadruplex DNA by the binding of porphyrins with cationic side arms.
Yamashita T; Uno T; Ishikawa Y
Bioorg Med Chem; 2005 Apr; 13(7):2423-30. PubMed ID: 15755644
[TBL] [Abstract][Full Text] [Related]
20. Solution NMR Structure of a Ligand/Hybrid-2-G-Quadruplex Complex Reveals Rearrangements that Affect Ligand Binding.
Wirmer-Bartoschek J; Bendel LE; Jonker HRA; Grün JT; Papi F; Bazzicalupi C; Messori L; Gratteri P; Schwalbe H
Angew Chem Int Ed Engl; 2017 Jun; 56(25):7102-7106. PubMed ID: 28524432
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
